Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0197 ATGAAATTTTTAACTTCATTTTTGTTTCTCTCTTTGATTTTCACAATCTCTCTTGTGAATTCAGACACTCTACCCCAAAATGAAGTTTGGGCACTTACAAGCTTTAAAGAAGCAATCTATGAAGACCCAAATCTAGTTTTATCAAATTGGAATATGCTTGAATCAGATCTTTGCAACTGGTTTGGTGTATCTTGTACTCTGGCTAGAGATCATGTCATCAAGCTAAACATCTCAGCTTCATCATTAAGAGGATTTCTTGCAAAGGAATTAGGCCAAATCACATATTTGCAAGAATTAATTTTGCATGGAAACAATCTAATCGGAACGATACCTAAAGAATTGTGTGTGTTGAAATCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACTGGACCGATTCCTCCGGAGATTGGAAATTTAACTCTACTTATGAACATAAACCTGCAGTCCAATGGATTGACTGGTAGGATACCTCATGAGTTTGGAAATTTGAGATACCTTCAAGAACTTCGGCTCAATAGGAATAAGTTTCAAGGACCCGTTCCTGCTAGTGGCAGTTCTAATTTTGCTTCAAATGTGCATGGAATGTATGCATCAAACGAGAATGCAACTGGCTTCTGTCGTTTGCCTCAGTTAAAAGTAGCAGACTTTTCGTATAATTTTTTAGTTGGCAGCATACCCAAATGCTTGGAGTATCTTCCAAGGTTAGGCTTTCAAGGGAACTGTCTCCAGAGCAATGATCCAAAGCAGCGGCCTTCCACACAATGCGGTGGTGCTTCACCTGCCAGGAGTCAGCCAGTGGTGAACAACCAATACCACGAACTAGCTGATCATACACGCAAGCATCACAGAACATCAGAATGGCTTTTAGCTATAGAAATAGTAGCAGGAGCTATGGTCGGTTCTCTCTGCCTGATTGCCATTCTTGCTGCTTTTCAAAGATGCAAGAACAAATCATCTATCATTATTCCTTGGAAAAAATCTGCTAGCCAGAAAGATCACACTACAGTATATATAGACCCAGATATGTTAAAGGATGTGAAAAGGTATAGCAGACAAGAGCTTGAAGAGGCTTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCGGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGACCTGAGATTGCTGTAATTTCCCTCTGTATCAAGGAGGAGCATTGGACAGGATATCTGGAGCTCTACTTTCAGAGAGAGGTGGCAGAGTTGGCAAGGTTAAATCATGAGAATACTGGAAAACTACTGGGATATTGTAGAGAGAGCAATCCGTTTTCAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGAGCACCTACATTGCTATGAAGAAGGATGTCAATTCTCCTGGACACGGCGTATGAAAATTGTCATAGGCATTGCGCGTGGACTCAAGTATTTGCACACAGAAGTTGACCCTCCATTCACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTCACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGCTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCCGGTTCTATTAGCAGCCAAGGTGCTGTTTGTGTTCTTCCAAATTCCCTTGAGGCACGCCATCTTGATACCAAAGGAAATATACATGCTTTTGGAGTACTTCTACTAGAGATAATCAGCGGGCGACCTCCATACTGTAAGGAAAAAGGTTACTTGGTGGATTGGGCCAAAGACTATCTTGAAAAGCCAGAAGTTATGTCACATTTGGTGAATTCAGAATTGAAAAATTTTAGACATGATGACCTCAAAGTGATATGCGAGGTGATAACTCTTTGTATCAATCCGGATACAACTGCGCGTCCTTCTATGCAAGAATTATGTAGCCTGCTGGAGAGCAGAATCGACACATCAGTAAGCGTGGACCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCTCTTTTAGCATAA 1983 0.409 MKFLTSFLFLSLIFTISLVNSDTLPQNEVWALTSFKEAIYEDPNLVLSNWNMLESDLCNWFGVSCTLARDHVIKLNISASSLRGFLAKELGQITYLQELILHGNNLIGTIPKELCVLKSLKVLDLGMNQLTGPIPPEIGNLTLLMNINLQSNGLTGRIPHEFGNLRYLQELRLNRNKFQGPVPASGSSNFASNVHGMYASNENATGFCRLPQLKVADFSYNFLVGSIPKCLEYLPRLGFQGNCLQSNDPKQRPSTQCGGASPARSQPVVNNQYHELADHTRKHHRTSEWLLAIEIVAGAMVGSLCLIAILAAFQRCKNKSSIIIPWKKSASQKDHTTVYIDPDMLKDVKRYSRQELEEACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNHENTGKLLGYCRESNPFSRMLVFDYASNGTLHEHLHCYEEGCQFSWTRRMKIVIGIARGLKYLHTEVDPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSISSQGAVCVLPNSLEARHLDTKGNIHAFGVLLLEIISGRPPYCKEKGYLVDWAKDYLEKPEVMSHLVNSELKNFRHDDLKVICEVITLCINPDTTARPSMQELCSLLESRIDTSVSVDLKSSSLAWAELALLA* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0197 660 MobiDBLite consensus disorder prediction 245 266 - -
Mal6g0197 660 ProSiteProfiles Protein kinase domain profile. 361 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0197 660 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 658 - -
Mal6g0197 660 SUPERFAMILY L domain-like 26 237 - -
Mal6g0197 660 PANTHER PROTEIN MALE DISCOVERER 2 7 658 - -
Mal6g0197 660 Gene3D Phosphorylase Kinase; domain 1 334 442 - -
Mal6g0197 660 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Mal6g0197 660 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Mal6g0197 660 Gene3D Ribonuclease Inhibitor 142 265 IPR032675 -
Mal6g0197 660 SUPERFAMILY Protein kinase-like (PK-like) 340 634 IPR011009 -
Mal6g0197 660 Gene3D Transferase(Phosphotransferase) domain 1 443 649 - -
Mal6g0197 660 Pfam Protein tyrosine and serine/threonine kinase 365 633 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0197 Mal-Chr6 2835765 2839433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0197 7 640 Receptor kinase-like Gene Family AT2G35620 28.264 1.56e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mal6g0197 PK_Tyr_Ser-Thr 1.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0197 - - gmx:100794714 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0197 6 2835765 2839433 Mal6g0197 6 2835765 2839433 ECH
Mal6g0197 6 2835765 2839433 Mal7g4906 7 117794095 117797867 PCT