Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0188 ATGTTGGAAGTAAAAAAGGAGCTGAAGGATTTTGAAATTGATTCACCAACTCATCGAGATTTGCTTCATTTATGTCTTTCTTCGCCTAATTGCAATAGCGACACTTGTTTTTTCGAATCATCTCCTGCTACAGTGAAAACAAAATCGCAAATTAGCTCGACAAATGGAATCTGGACAGAGGAAGAGGATAATCTTTTGATTGAGATAGTCAAGAAGCACGACGGAAGCATCTGGAAAAGTATAGGTGGATGCGCTGCATACTTCCCTGGCCGGACCGACATCGAATGCTTCCATCGCTGGCAAAAGGTTTCAAATCATGATCTTGTAAAAAGATCATGGACAAAGGAGGAGGATGAGGCCCTAATTGAACTAGTAAGAAAGTATGGCTGCAAGAGATGGTCTTTTATTGCGAAATTCATGCCAGGTCGTATTGGAAAGCAATGTCGAGAGAGGTGGCATAATAACCTTGATCCAGCTATAAAAAAGGGTGCATGGACGGAGGAGGAGGAATCAATACTTGCTCACTATCACCAAATATATGGCAGTAAATGGTCAGAAATTGCAAGGGTTCTTCCTGGAAGGAGTGACAATGCTATAAAAAATCATTGGAACAGCTCAATGAAGAAGAAATCGTCGGCATCACCTACTAGGTGTGACATGGATGTATCCACTTCCAGTTTCTGCTCTTCTCTAATAAAGCCAGCGCATGATTCGGTTAAAGCCGAGGATCAAAGCTTAATTGGAATGGTTTCTCCCAAGCAAAGTAATTGGTTGAATCATAATGCTGATAACTTCCCAACTAGAATGGTTATTCGAAATGCTTCCGTAGAGGAATTTCGGTCTGATAAAAACAATTTTGGCGTGGCAACTCCTAGGGCCTCAGAAAAAAGTGAAAGAAGATTGATTAATTTACGAAATGAGATGGAAACATTTATAGGTTGCAAAGACCATGCCAACTTCGCAGTTAAACACATGTTCTCGAACTCGTATATGGATATGCTTGCTACAAATATGGATTGTTTCCCTCCTTCCAGTACTCTTACTTATGAGGCCTATAATTCTCCCAAATGGCAAAAAGTTTCTTTTTCAGATTCAAAGTTTATTGTTGGTAATGAATCTGATAGTTCCTATTTTAGCTACTCAAAATTGGCTAATCATGAGAAGAAAGTTCAAGTTGGAATGGAAAGCAATAACAAAAGCGACGTGAGCCCAGAATCGGTACTAAGAAACTTAGCAATGACCTATGAGAACATTCCTTCTATTATAAGGAAACGATCTTCTAGGAAGTCATGCAAAGCTGCCAATTATGGTAAGTCCCAAACACCTTCGAGAATGGCCGTCTCAACTCCTGAAGCAGGATGTTTAATTGGTTTTGATAATTTAAAACTCAACCAAGGATTTATTCCATTCCTTCCTAGACATGCCATGGAATGA 1434 0.3961 MLEVKKELKDFEIDSPTHRDLLHLCLSSPNCNSDTCFFESSPATVKTKSQISSTNGIWTEEEDNLLIEIVKKHDGSIWKSIGGCAAYFPGRTDIECFHRWQKVSNHDLVKRSWTKEEDEALIELVRKYGCKRWSFIAKFMPGRIGKQCRERWHNNLDPAIKKGAWTEEEESILAHYHQIYGSKWSEIARVLPGRSDNAIKNHWNSSMKKKSSASPTRCDMDVSTSSFCSSLIKPAHDSVKAEDQSLIGMVSPKQSNWLNHNADNFPTRMVIRNASVEEFRSDKNNFGVATPRASEKSERRLINLRNEMETFIGCKDHANFAVKHMFSNSYMDMLATNMDCFPPSSTLTYEAYNSPKWQKVSFSDSKFIVGNESDSSYFSYSKLANHEKKVQVGMESNNKSDVSPESVLRNLAMTYENIPSIIRKRSSRKSCKAANYGKSQTPSRMAVSTPEAGCLIGFDNLKLNQGFIPFLPRHAME* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0188 477 Gene3D - 54 109 - -
Mal6g0188 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 103 IPR017930 -
Mal6g0188 477 SUPERFAMILY Homeodomain-like 107 203 IPR009057 -
Mal6g0188 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 161 211 IPR017930 -
Mal6g0188 477 Pfam Myb-like DNA-binding domain 58 102 IPR001005 -
Mal6g0188 477 Pfam Myb-like DNA-binding domain 110 156 IPR001005 -
Mal6g0188 477 Pfam Myb-like DNA-binding domain 162 204 IPR001005 -
Mal6g0188 477 ProSiteProfiles Myb-like domain profile. 105 156 IPR001005 -
Mal6g0188 477 Gene3D - 163 226 - -
Mal6g0188 477 SUPERFAMILY Homeodomain-like 51 108 IPR009057 -
Mal6g0188 477 PANTHER TRANSCRIPTION REPRESSOR MYB5 53 300 - -
Mal6g0188 477 ProSiteProfiles Myb-like domain profile. 157 207 IPR001005 -
Mal6g0188 477 CDD SANT 58 103 IPR001005 -
Mal6g0188 477 Gene3D - 110 161 - -
Mal6g0188 477 CDD SANT 112 156 IPR001005 -
Mal6g0188 477 SMART sant 54 106 IPR001005 -
Mal6g0188 477 SMART sant 109 158 IPR001005 -
Mal6g0188 477 SMART sant 161 209 IPR001005 -
Mal6g0188 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 160 IPR017930 -
Mal6g0188 477 PANTHER MYB PROTEIN-RELATED 53 300 - -
Mal6g0188 477 CDD SANT 164 204 IPR001005 -
Mal6g0188 477 ProSiteProfiles Myb-like domain profile. 50 104 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0188 Mal-Chr6 2659621 2662703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0188 46 434 MYB Transcription Factor Family AT5G02320 37.897 1.22e-68 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g0188 Myb_DNA-binding 1.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0188 - - cam:101501970 607.06