Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0187 ATGGCGACATTACCGGTGGAGCAAACAGGTGAATCAGCGACGGCGGAGTCGCAGAGATCGATTCCGACGCCGTTTCTGACGAAAACGTATCAACTTGTTGATGATCCTTCCGTTGATGATTTAGTTTCATGGAATGAAGATGGAACTAGCTTCATAGTTTGGAAACCTGCTGAATTCGCTAGAGATTTGCTTCCAAAATATTTCAAACACAATAACTTCTCCAGTTTTGTTCGTCAACTTAATACCTATGGATTTCGGAAAGTTGTACCTGACCGGTGGGAATTTGCGAATGATGGATTCCGACGAGGCGAGAAAAATCTGCTCCGGGATATACAGCGGAGAAAAATATTGCCGGCGGCAGGAACAGCTATGGCGACGGCGGTTGCTGCGGCTAATACTGTGACGGTAGCTATGGCGGCACCGGTTAGAATGGTGTCTCCAGCAACTTCTGGTGACGAACAGGTGGTTTCGTCGAATTCATCTCCCATTGCGGTGAATAATTGTGCTACGGTGCACCGTAGCACAAGTTGCACCACTGCGCCGGAATTAGTTGAAGAGAATGAAAGGCTTAAGAAAGAGAATATGCAATTGAGTAATGAGTTGAGTCAATTGAAAGGTCTTTGTAATAATATACTTGCTATGATGAGTAGTTATGCTTCTGGTTTTAGTAGACAGTTAGAATCTTCAACTAGCGCCGCAACAGCACGGGGCGTGGTTGTTACAGAAGGGAAAGTTTTGGATCTTTTGCCTACAAGGAATGTTCCAGTAGCTGAGGAAAATGCAGCGGTTAATGTAGATGGAGGTGCTGGTGGCATGCCGTGTGAGACGGCGAGTTTGGTGGAACCTGAGGTTCAGGCGGCACCTCAGGTTCCTAAGCTGTTTGGGGTTTCAATTGGAATTAAACGATGTAGGACCGAGAATGAGGTTGAACCAGAGAGAGAGGAACGGGAACAACATCAGCAAATGCGAATGCAGATGCAAACACTATCCTCGCAAGAACCTGATCGAGGATCGGATGTGAAATCTGAACCGCGTGATGGTGACTCGGATAATCAAGAGCATCGTTGGAATTCGATGAAATAG 1083 0.4635 MATLPVEQTGESATAESQRSIPTPFLTKTYQLVDDPSVDDLVSWNEDGTSFIVWKPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDGFRRGEKNLLRDIQRRKILPAAGTAMATAVAAANTVTVAMAAPVRMVSPATSGDEQVVSSNSSPIAVNNCATVHRSTSCTTAPELVEENERLKKENMQLSNELSQLKGLCNNILAMMSSYASGFSRQLESSTSAATARGVVVTEGKVLDLLPTRNVPVAEENAAVNVDGGAGGMPCETASLVEPEVQAAPQVPKLFGVSIGIKRCRTENEVEPEREEREQHQQMRMQMQTLSSQEPDRGSDVKSEPRDGDSDNQEHRWNSMK* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0187 360 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0187 360 Gene3D - 17 115 IPR036388 -
Mal6g0187 360 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0187 360 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0187 360 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0187 360 MobiDBLite consensus disorder prediction 336 360 - -
Mal6g0187 360 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 347 IPR027725 -
Mal6g0187 360 MobiDBLite consensus disorder prediction 304 360 - -
Mal6g0187 360 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal6g0187 360 Coils Coil 180 207 - -
Mal6g0187 360 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2B 9 347 - -
Mal6g0187 360 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Mal6g0187 360 MobiDBLite consensus disorder prediction 304 321 - -
Mal6g0187 360 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0187 Mal-Chr6 2655505 2656691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0187 16 356 HSF AT4G11660 50.142 3.31e-94 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal6g0187 HSF_DNA-bind 8.3e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0187 K09419 - gmx:100791020 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0187 6 2655505 2656691 Mal6g0187 6 2655505 2656691 ECH