Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0186 ATGTCGACACCACCGAACCGTTCCTCATCAGACATCATCGATTCAACCCCATTTCTCACCAATCCCGGCGCCAGTTCCTCCTCCGATGACCTCAACTCCGGCCGTCGTCGTCGCCAGCGTCTTCTCCAAGCCGCACGCTTCCTCCGTCAAGCAAGCGGCCGTCGAACGATGCGTGAACCTTCCGTCGTCGTTCGCGAAGCTGCGGCGGAGCAATTGGAAGAACGACAAAGCGATTGGGCGTATTCGAAGCCGGTTGTGATTCTTGATATCGTTTGGAACTTCGCCTTCGTCATTGTGGCGGGAACGGCGTTGTTTCTGAGCCGGAATGAAGCGCCGGAGATGCCGTTGAGGTTGTGGATTGCGGGATATGTATTGCAATGTGTTCTTCATATGGTCTGTGTTTGTTTTGAGTATAGAAGAAGGAGAAGGTATCAACGTTCTTCGTCTTCGAGTGCTGTAGCAGGTTCAGATAGGGTTGGTAGTGGGAATTTGAGTTCAAGGGAAGGTTCTCGTTCTGTTGTTTCTGGTTCCAGTTATGTTTCATTGGCGCAATTTGATGAAGAGGGTACTAGTGTTGCAAAGCATTTGGAATCAGCCAATACCATGTTTTCATTTATATGGTGGATTATTGGATTCTACTGGGTATCAGCTGGTGGTCAAGCTTTAGCCCAAGATTCTCCTCAGCTTTACTGGTTATGTATAGTATTTCTTGGTTTTGATGTTTTCTTTGTCGTTTTCTGTGTTGCACTGGCCTGTATCATTGGTATCGCTGTTTGCTGTTGTCTTCCATGTATCATTGCACTTCTTTATGCTGTTGCAGACCAGCAGGAAGGTGCATCAAAGGAAGACATTGAGCAGTTGTCGAAATTCAAATTCCGAAGAGCTGAAAGTAATGAGAAACAAACTGATAATATTCAAGGACCTGTTGGAGGAATAATGACTGAATGCCGGGCAGATTCACCTATTGAACATGTTCTGGCTGAGGAGGATGCGGAATGTTGCATCTGCCTTTCTTCTTATGACGATGGAGTTGAACTAAGAGAACTTCCTTGTGGTCACCATTTTCACTGTGCCTGTGTGGATAAATGGCTGTATATTAATGCCACGTGCCCTCTCTGCAAGTATAACATCTTGAAAAGTAGTAATCTCGGTCAAGAAGAAGTGTAG 1167 0.4627 MSTPPNRSSSDIIDSTPFLTNPGASSSSDDLNSGRRRRQRLLQAARFLRQASGRRTMREPSVVVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVIVAGTALFLSRNEAPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRRYQRSSSSSAVAGSDRVGSGNLSSREGSRSVVSGSSYVSLAQFDEEGTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIVFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQQEGASKEDIEQLSKFKFRRAESNEKQTDNIQGPVGGIMTECRADSPIEHVLAEEDAECCICLSSYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSNLGQEEV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0186 388 MobiDBLite consensus disorder prediction 1 35 - -
Mal6g0186 388 MobiDBLite consensus disorder prediction 1 30 - -
Mal6g0186 388 ProSiteProfiles Zinc finger RING-type profile. 333 374 IPR001841 -
Mal6g0186 388 Pfam Ring finger domain 332 374 IPR001841 -
Mal6g0186 388 SMART ring_2 333 373 IPR001841 -
Mal6g0186 388 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 388 - -
Mal6g0186 388 SUPERFAMILY RING/U-box 323 380 - -
Mal6g0186 388 CDD RING-H2_RNF111_like 332 376 - -
Mal6g0186 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 319 386 IPR013083 -
Mal6g0186 388 MobiDBLite consensus disorder prediction 152 171 - -
Mal6g0186 388 PANTHER TARGET OF ERK KINASE MPK-1 5 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0186 Mal-Chr6 2645385 2651425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0186 1 381 C3H Transcription Factor Family AT1G68070 48.438 4.21e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0186 - - gmx:100790497 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g3970 5 109269794 109275274 Mal6g0186 6 2645385 2651425 PCT