Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0183 ATGGGCGGCGAGGAGTACCAAATTCTGGTGGATCGGTGTCGGAGGTTGGAAGAGCAACAAGGCAAACTGAAGGAGCAGTTCGATGAGCTAGTTCAGGAGAAGAAGAAGCTCAAGGTCAAAGACAATGAAGATTCAACCGCTGGTTTTCTTTCTGGTTTCTTCTTCTCTCTTAGTCCTTACGCTAACGTTTTGAAATGCATGGGACATGCTGTTTATGTCCACAACGTTTCCTCTGGCCAGATCATATACTGGAATGACTCAGCAGAAACTCTGTATGGATGGAAGGAGCATGAAATAATTGGACAAAGATTAGCTGATTTCCTAGTTGCTGAGGAATATTATGCATCTCTACGAAAAATTCTGCATCAGTTGATCACAGGAGTGCCATGGTCTGGACAGTTTCCTTTGAAGAAGAGGTCTGGTGAAATATTTATGGCAATGGTAACAAAAACTCCTCTTTATGAGGACGGTAAACTTGTTGGTGTTATCTCTATTTCTAGTGATGCAGTTTTAGTTAACTCTAAGGATTTTGACAATCGAAGAACTTGCCAATCTAGTTCGAATGACCAACCTGGAATTCAAAAGTTAAAAAGGATTCATTGGCCTCCACGCCCGCAAATTGCATCATCTGTTTCCAATCTGGCATCAAAGTTTCTTCCACTCCGGCAGACAGATGACACAGTTTCCAAGAACACTTCGACGAATGCAGATGATGAAAAACAAAGGAAACATAGCATTTATGAAACCGAATCTTGTTCCAGAAGTCACCAAAAAGATAACACAACTGTCCGGGAGGCCAGCAAGAAGGATGAGTCTACAGCTGAATTTAGCCAGCCTTCTAAAATTGCAGCTAGAGTCCTTGCTAAGCTTCGAGGGGGAAATGGAAAATGTTGGAAGGATACTAGAAGTTTTAAAGACAATTGTACAACTGACGATAGTTCAGGAAGTAATAGAGTGAATAATGAAAATGATTTATATGGAAGTTCAGTTGCATTAACATCGCACCAGGATATCTCTAATGGAGAAGATAAAGAAGAAAATCTCCAAAAAAACCCTTTGTTAAGATTACGCTGTACAATCGATCCAAAGAAATTGGAGCCCAAAGCTACGAATATGGTGATAGAAGATGAAATTGAAGTGCAAAAGCAGCAGGAAGGGTTGCCGTTGGCGAGCTCAAAGGAGAGTATAGGTGGCCGCGCGAGTTCATCAAGCAAAGGGAAAAGTGAATCAAACTCTGTTGTAGAGCGTGAAATCCATTGGGAAGACCTTCAATTAAGAAAGGAGATTGGGCAAGGTTCTTTTGCTGTTGTTTATCATGGAATTTGGAATGCATCGGATGTTGCCGTCAAGGTTTACTTTGGGAAGGAATACGCGGAGGAGACTTTACGAGACCACAAAAAAGAGGTTGATATAATGAAAAGATTGAGACATCCTAATGTATTGCTTTTCATGGGAGCAATTTATTCTCAGGAAAGGCATGCCATAGTGACGGAGTTATTACCTAGAGGAAGCCTTTTCAAAACGCTTCACAAGAACAATCAAACATTAGACATCAAAAGGCATCTCAGAATGGCTCTTGATGTTGCTAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATTGTGCATAGAGACCTAAAATCTTCTAACCTTCTTGTTGATAAAAACTGGAATGTCAAGGTTGGAGACTTTGGCCTGTCCAAGTTGAAGCATGCAACATTACTGACTACCAAATCCGGGAGAGGCACCCCACAATGGATGGCCCCTGAAGTCCTTCGCAGTGAACCTTCAAATGAAAAGTCTGATGTGTTCAGTTATGGTGTCGTCCTTTGGGAAATAATGACTCAATCTATTCCATGGAAAAATTTGAATTCCTTACAGGTTGTTGGAGTAGTAGGCTTTATGGATAGAAGACTGGAGCTGCCGGAGGGGCTTGACCCCCATGTAGCGTCAATCATAAATGACTGTTGGCAAAGTGATCCGGAACAACGACCATCGTTTGAAGAGCTAGTACAGAGAATGATGTTGATTCTCAGCAGAGTAACAGCTTTGTCATTGAACAGAATTGCAGAATCCTGA 2082 0.415 MGGEEYQILVDRCRRLEEQQGKLKEQFDELVQEKKKLKVKDNEDSTAGFLSGFFFSLSPYANVLKCMGHAVYVHNVSSGQIIYWNDSAETLYGWKEHEIIGQRLADFLVAEEYYASLRKILHQLITGVPWSGQFPLKKRSGEIFMAMVTKTPLYEDGKLVGVISISSDAVLVNSKDFDNRRTCQSSSNDQPGIQKLKRIHWPPRPQIASSVSNLASKFLPLRQTDDTVSKNTSTNADDEKQRKHSIYETESCSRSHQKDNTTVREASKKDESTAEFSQPSKIAARVLAKLRGGNGKCWKDTRSFKDNCTTDDSSGSNRVNNENDLYGSSVALTSHQDISNGEDKEENLQKNPLLRLRCTIDPKKLEPKATNMVIEDEIEVQKQQEGLPLASSKESIGGRASSSSKGKSESNSVVEREIHWEDLQLRKEIGQGSFAVVYHGIWNASDVAVKVYFGKEYAEETLRDHKKEVDIMKRLRHPNVLLFMGAIYSQERHAIVTELLPRGSLFKTLHKNNQTLDIKRHLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWNVKVGDFGLSKLKHATLLTTKSGRGTPQWMAPEVLRSEPSNEKSDVFSYGVVLWEIMTQSIPWKNLNSLQVVGVVGFMDRRLELPEGLDPHVASIINDCWQSDPEQRPSFEELVQRMMLILSRVTALSLNRIAES* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0183 693 Gene3D Transferase(Phosphotransferase) domain 1 502 684 - -
Mal6g0183 693 Gene3D Phosphorylase Kinase; domain 1 416 500 - -
Mal6g0183 693 Coils Coil 6 40 - -
Mal6g0183 693 TIGRFAM sensory_box: PAS domain S-box protein 77 168 IPR000014 -
Mal6g0183 693 PRINTS Tyrosine kinase catalytic domain signature 497 510 IPR001245 GO:0004672|GO:0006468
Mal6g0183 693 PRINTS Tyrosine kinase catalytic domain signature 602 624 IPR001245 GO:0004672|GO:0006468
Mal6g0183 693 PRINTS Tyrosine kinase catalytic domain signature 536 554 IPR001245 GO:0004672|GO:0006468
Mal6g0183 693 PRINTS Tyrosine kinase catalytic domain signature 646 668 IPR001245 GO:0004672|GO:0006468
Mal6g0183 693 PRINTS Tyrosine kinase catalytic domain signature 583 593 IPR001245 GO:0004672|GO:0006468
Mal6g0183 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Mal6g0183 693 MobiDBLite consensus disorder prediction 383 413 - -
Mal6g0183 693 MobiDBLite consensus disorder prediction 232 275 - -
Mal6g0183 693 MobiDBLite consensus disorder prediction 385 409 - -
Mal6g0183 693 CDD STKc_MAP3K-like 429 675 - -
Mal6g0183 693 Pfam PAS domain 73 168 IPR000014 -
Mal6g0183 693 SUPERFAMILY PYP-like sensor domain (PAS domain) 60 168 IPR035965 -
Mal6g0183 693 Gene3D PAS domain 69 171 - -
Mal6g0183 693 ProSiteProfiles Protein kinase domain profile. 423 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0183 693 PANTHER SERINE-THREONINE PROTEIN KINASE 9 685 - -
Mal6g0183 693 SMART serkin_6 423 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0183 693 Pfam Protein tyrosine and serine/threonine kinase 423 674 IPR001245 GO:0004672|GO:0006468
Mal6g0183 693 ProSitePatterns Protein kinases ATP-binding region signature. 429 450 IPR017441 GO:0005524
Mal6g0183 693 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 9 685 - -
Mal6g0183 693 MobiDBLite consensus disorder prediction 225 278 - -
Mal6g0183 693 SUPERFAMILY Protein kinase-like (PK-like) 412 681 IPR011009 -
Mal6g0183 693 ProSiteProfiles PAS repeat profile. 56 128 IPR000014 -
Mal6g0183 693 SMART pas_2 58 126 IPR000014 -
Mal6g0183 693 CDD PAS 70 168 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0183 Mal-Chr6 2623955 2635957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0183 6 681 MAP Kinase Kinase Kinase AT4G23050 44.959 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mal6g0183 PK_Tyr_Ser-Thr 1.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0183 - - mtr:MTR_5g010730 1162.9