Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0166 ATGGAAACATACAAGAAGATAGGGGAATTGGCAAATGATGATATAAGAGGATTGGAATTTGATTCAGAGGAAAAAGCGGCACGTTTTTATGACATCTATGCACGATGTCACGGGTTTGCGATGCAAAAAGATGATGTAGACAAGGATTCTGAAGGGAATATAATTGCTCGTCGATTAGTATGTAATAGAGACGGTGTGTTGGAAGAGGTCGAGCGTTCGGCGATATTGGCTAGCAAGAGCATGAAAGTAAAATCCAGATGCTTTGCCAAACATTGA 276 0.4058 METYKKIGELANDDIRGLEFDSEEKAARFYDIYARCHGFAMQKDDVDKDSEGNIIARRLVCNRDGVLEEVERSAILASKSMKVKSRCFAKH* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0166 91 Pfam FAR1 DNA-binding domain 28 89 IPR004330 -
Mal6g0166 91 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0166 Mal-Chr6 2351284 2351831 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g0166 FAR1 5.9e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0166 - - mtr:MTR_8g035530 97.0561