Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0154 ATGCAAGAACCAAGCTTAGGGATGATGCAGGGTGGTGGTGGTGGTTACGGCGGAGATGGCGGTGGTGACAACAGACAGCTTAAGGCGGAGATAGCTACACATCCTTTGTATGAACAGCTTCTGTCTGCACATGTAGCATGTCTTCGAGTTGCTACTCCTATAGATCAGTTACCATTGATTGATGCACAGTTATCTCAATCTCATCATCTTCTACGATCTTATATCTCTCAACAAACTCATTCTCTTTCTCCACATGACCGTCAACAACTCGACAATTTTCTCGCACAATATTTGATAGTTTTGTGTACATTCAAAGAACAGCTTCAGCAACATGTGAGAGTTCATGCGGTTGAGGCTGTTATGGCTTGCCGTGATATTGAAAGTACCTTACAAGCTCTCACAGGAGTGAGTTTGGGAGAAGGAAGTGGTGCGACAATGTCGGATGATGAAGATGAACAATTGCAGATGGATTATTGTTTAGATGGTCAGTCAAGTGGTGGTGAAGGGCATGACATGATGGGACTTGGTCCATTGCTTCCTACTGAATCCGAAAGGTCACTCATGGAAAGAGTTCGCCAAGAACTCAAAATTGAGCTCAAACAGGGTTTTAAGTCTCGAATCGAAGATGTAAGGGAGGAAATATTAAGGAAAAGAAGAGCTGGGAAATTACCAGGTGACACAACTTCAGTCTTAAAGAACTGGTGGCAGCAACATGCAAAATGGCCTTATCCAACGGAAGATGACAAAGCAAAACTTGTGGAGGAGACAGGGTTGCAGCTGAAGCAAATCAATAATTGGTTCATTAACCAAAGGAAACGAAACTGGCACAGTAATTCTCAATCTGTTACCTCTTTGAAGTCGAAACGCAAAAGACAAAAGGGTTGTACACTCACCAACCAACCCTTCCTTCCACGCAAATAA 921 0.4321 MQEPSLGMMQGGGGGYGGDGGGDNRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQTHSLSPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIESTLQALTGVSLGEGSGATMSDDEDEQLQMDYCLDGQSSGGEGHDMMGLGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKRQKGCTLTNQPFLPRK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0154 306 Gene3D - 215 276 - -
Mal6g0154 306 ProSiteProfiles 'Homeobox' domain profile. 214 277 IPR001356 GO:0003677
Mal6g0154 306 SMART HOX_1 216 281 IPR001356 GO:0003677
Mal6g0154 306 SMART KNOX1_2 25 69 IPR005540 GO:0003677|GO:0005634
Mal6g0154 306 MobiDBLite consensus disorder prediction 278 306 - -
Mal6g0154 306 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 2 291 - -
Mal6g0154 306 Pfam KNOX1 domain 27 68 IPR005540 GO:0003677|GO:0005634
Mal6g0154 306 ProSiteProfiles ELK domain profile. 194 214 IPR005539 GO:0003677
Mal6g0154 306 SMART KNOX2_2 80 135 IPR005541 GO:0003677|GO:0005634
Mal6g0154 306 Pfam Homeobox KN domain 234 273 IPR008422 GO:0003677|GO:0006355
Mal6g0154 306 Pfam KNOX2 domain 83 134 IPR005541 GO:0003677|GO:0005634
Mal6g0154 306 MobiDBLite consensus disorder prediction 1 22 - -
Mal6g0154 306 SUPERFAMILY Homeodomain-like 216 281 IPR009057 -
Mal6g0154 306 CDD homeodomain 217 278 IPR001356 GO:0003677
Mal6g0154 306 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 2 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0154 Mal-Chr6 2210413 2222211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0154 1 290 Homeobox Transcription Factor Family AT1G62990 78.451 9.74e-167 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mal6g0154 KNOX2 1.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0154 - - zju:107405822 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0154 6 2210413 2222211 Mal6g0154 6 2210413 2222211 ECH