Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0147 ATGGTGAAGGTCGTTGGAATATATATGTTAGCCAAAAGTGCAGGATTGAAGAGGACTGGAAAAAGCTGCAGCAGACTCAGATGGTTGAATTACTTGAAACCTGACATTAAGAAAGGGAACCTTACACCACAAGAACAATTGTTGATCCTTCAACTTCATTCCAAGTGGGGTAACAGGTGGTCAAAAATTGCTCAACATCTACCCGGAAGAACAGATAATGAGATAAAGAACTATTGGAGAACAAGGGTGCAAAAACAAGCACGCCAACTTAACATTGAATCTGGTAGCAAGAGATTCATTGATGCTGTTAAGTGTTTTTGGATGCCAAGATTACTTCAAAAGATGGAACAGAATTCTTCTCCAAGCTCTGATCACTCTTCTATGGAAAATATGAATAATTTTGGGAATTCTATTGAAGCTTCAACTAGTAGTAATTCAAGCTTCAATATTCCTTCTATGTCTCCATCATCTCATCCACAGAGAGGATTCATAGATGCCTCAAGTGCAAATCATTTAAGTACAATGTCAACCTTGGTACTAATCGCAGTGATGGCATATTTCTCACAGCTTGACAATGAAGAAATTGACTAA 591 0.379 MVKVVGIYMLAKSAGLKRTGKSCSRLRWLNYLKPDIKKGNLTPQEQLLILQLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQNSSPSSDHSSMENMNNFGNSIEASTSSNSSFNIPSMSPSSHPQRGFIDASSANHLSTMSTLVLIAVMAYFSQLDNEEID* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0147 196 Pfam Myb-like DNA-binding domain 38 81 IPR001005 -
Mal6g0147 196 Gene3D - 41 83 - -
Mal6g0147 196 SMART sant 37 85 IPR001005 -
Mal6g0147 196 CDD SANT 42 81 IPR001005 -
Mal6g0147 196 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 9 191 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mal6g0147 196 SUPERFAMILY Homeodomain-like 17 92 IPR009057 -
Mal6g0147 196 MobiDBLite consensus disorder prediction 117 161 - -
Mal6g0147 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 87 IPR017930 -
Mal6g0147 196 ProSiteProfiles Myb-like domain profile. 33 83 IPR001005 -
Mal6g0147 196 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 9 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0147 Mal-Chr6 2104121 2105222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0147 10 125 MYB Transcription Factor Family AT1G68320 81.897 1.08e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal6g0147 Myb_DNA-binding 3.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0147 K09422 - gmx:100780759 263.462