Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0131 ATGGACTGTAATGATGTGCATTACTATGTAGAGTCACCAGGTTTTGCTTATAGTCATGGGAACAATGGAGGTTTAATACAACATTTGAGAACTCCTTCAGACTCAACACCACAAATGAGTGCTGGTCATATTCTTTTTAGTTATGACCAGGTTCTCGAAATTACTAATGGGTTTTCAAGTGAAAACGTGATAGGCGAAGGGGGTTTTGGGCGTGTTTATAAGGCTTTAATGCCCGATGGTAGAGTCGGAGCGGTTAAGCTGTTGAAGGCTGGTAGTGGTCAAGGAGAGAGGGAGTTCAGAGCAGAGGTTGATACTATTAGTCGTGTTCATCATCGACATCTGGTATCGTTGATTGGCTATTGTTTATCTGAGCGACAAAGAGTTCTTATTTATGAGTTTGTTCCTAATGGAAATCTTGATCAACATTTGCATGAAAGTGAATGGAATGTTTTGGATTGGCCCAAGAGGATGAAGATAGCAATTGGTGCTGCAAGGGGTCTAGCGTATTTGCATGAAGGCTGCAACCCAAAGATTATTCACAGAGATATAAAATCGGCTAATATACTTTTGGATAATGCTTATGAGGCACAAGTTGCAGACTTTGGACTTGCCAGACTAACCGACGATGCATATACTCATGTATCAACGAGGGTAATGGGTACTTTTGGCTATATGGCTCCAGAGTATGCAACAAGTGGAAAACTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTTCTTCTCGAGCTTGTAACTGGAAGGAAACCTGTTGATCCAACACAGCCTGTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCAATCGAGACAGGTGACTTTAGTGAACTAGTAGACCCAAGGCTTCAACGACAATATGTAGAAAGTGAAATGGTTAGAATGATTGAAGCAGCTGCGGCATGTGTTCGCCATTCTGCCCCAAAACGACCCCGTATGGTTCAGATTGCAAGAGCCTTGGACAGTGGAGATCAACTATATGATCTATCAAATGGAGTGAAATATGGTCAGAGCACAGTTTATGATTCCGGGCAATATAACGAAGACATTATGAGATTCAAAAGGATGGCTAATGGAAGTTTTGTCGACTCTGAATTTGATATGTACAGCTCAGAATACAGTTCAGGAGACATGTCTAGATCTATCATGGTGCCACAAAGTTCAAGTGATCATTTAGACATTAAAGCTATGCAAAACTAA 1233 0.4161 MDCNDVHYYVESPGFAYSHGNNGGLIQHLRTPSDSTPQMSAGHILFSYDQVLEITNGFSSENVIGEGGFGRVYKALMPDGRVGAVKLLKAGSGQGEREFRAEVDTISRVHHRHLVSLIGYCLSERQRVLIYEFVPNGNLDQHLHESEWNVLDWPKRMKIAIGAARGLAYLHEGCNPKIIHRDIKSANILLDNAYEAQVADFGLARLTDDAYTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDPTQPVGDESLVEWARPLLLRAIETGDFSELVDPRLQRQYVESEMVRMIEAAAACVRHSAPKRPRMVQIARALDSGDQLYDLSNGVKYGQSTVYDSGQYNEDIMRFKRMANGSFVDSEFDMYSSEYSSGDMSRSIMVPQSSSDHLDIKAMQN* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0131 410 Pfam Protein tyrosine and serine/threonine kinase 61 330 IPR001245 GO:0004672|GO:0006468
Mal6g0131 410 PANTHER RECEPTOR-LIKE KINASE 1 394 - -
Mal6g0131 410 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 394 - -
Mal6g0131 410 ProSiteProfiles Protein kinase domain profile. 58 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0131 410 Gene3D Phosphorylase Kinase; domain 1 26 133 - -
Mal6g0131 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Mal6g0131 410 Gene3D Transferase(Phosphotransferase) domain 1 134 345 - -
Mal6g0131 410 SMART serkin_6 58 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0131 410 SUPERFAMILY Protein kinase-like (PK-like) 35 331 IPR011009 -
Mal6g0131 410 CDD STKc_IRAK 64 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0131 Mal-Chr6 1867969 1875682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0131 31 388 Trihelix Transcription Factor Family AT1G70460 67.313 1.37e-176 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mal6g0131 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0131 - - mtr:MTR_5g034210 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0131 6 1867969 1875682 Mal6g0131 6 1867969 1875682 ECH