Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0119 ATGTTTCCTACATTTTCATTTTGGTTATATTTTATCCTTATTTTCAACTTGTGCCCAAAACAAATTGCATTTGCATTAGGAAATCAAACCGATCATTTGGCATTGCTCAAATTTAAGAAATCTATATCCAATGACCCATATAGAATCCTTGATTCTTGGAATGGTTCTACCCATTTCTGCAACTGGCGTGGAATCACATGTAACCCCATGTATCAAAGAGTTACAAAAATGAAGTTACCTGGATACAAATTGCATGGATCCTTATCTTCTCACATTGCCAATCTCTCTTTTCTGAGACACCTCGACCTTGCAGAAAACAACTTGTTTGGAAAAATCCCACAGGAGTTAGGCCAGTTGTTAGAATTGCAGCAACTTTATCTCACCAATAACTCGTTTGCTGGAGAAATTCCTACGAACTTGACAAATTGTTTCAACCTTAAATATTTATACTTGAGAGGGAACAATTTGATTGGCAAAATACCGATCGAAATAGGCTCTCTTCAAAAGCTTCAAGAATTGAGTGTTAGCGGAAACAATTTAGTCGGAGGAGTCCCACCATTTATAGGGAATCTTTCATTCTTAACAGCTCTTTCAGTTTCTGGTAATAATTTAGAGGGAAATATTCCACAAGAAATATGCCGCCTCAAAAACTTGACTAAAATATCCGTGGGGCTCAACAAACTATCTGGTACATTTCCTTTGTGTCTTTACAATATGTCATCTATGACTATGATCTCAGCTACAGACAACAAATTAATTGGCTCTCTTCCACCCAACATGTTCAACTCCATCCCCAATCTCAAAGTGTTTGAAATGGCTGTTAATCAAATCTCAGGTCTAATTCCCACTTCTGTTGCAAACGCTTCTACCCTTAGAAAACTTGATATCAGCAAAAACTATTTTGTCGGACAAGTTCCAAATCTCGGGAGGTTAAAATATCTTTTGAGGCTAAATTTGGAAATGAATAACCTTGGTGACAATTCAACTAAGGATTTGAATTTTTTAAAATCATTGACAAACTGTGCTAAGTTGCAACTGATTTCTATATCCTATAATAATTTTGGAGGTAGTTTGCCAAATTTGGTAGGCAATTTATCCACCCAACTTAGTCAACTATATTTTGGTGGTAATCAAATATATGGGCAAATTCCTCCCGAATTAGGAAATCTAAATAGTTTAATTTCCTTGACCATGGAAAACAACCGTTTTGAAGGGATGATTCCAGATTCTTTTGGGAAGTTTCAAAAGATACAAGTGTTAGATTTGAGTGGAAACCAATTGTTAGGACACATACCAGCCTTCATAGGTAACCTTAGTCAGATGTATTTTTTGAGTCTAGCACATAATATGTTAGGACAAAATATTCCCCCAAGCTTGGGAAGTTGTCAAAATTTACATCACCTAAACCTTTCACAAAACAATCTTACAGGAACCATACCCTTAAAGGTTTTTAGTATTTCATCTTTATCAAACTCACTGGACTTGTCACAAAACTCATTGAGTGGCAGCCTACCTATTGAAGTGGGTAGGCTAAAAAATATTAATAAGCTAGATGTCTCTGAGAATAATTTGTCTGGTGAAATTCCTATAACCATTGGTCAATGCAAAAGTTTAGAATACCTTTATTTGCAAGGAAACTCCTTCCACAAAATCATACCTTCCTCTTTTGCTTCTCTTAAAGGTCTTCGATATTTAGACATGTCAAGAAATCAGTTGTTTGGACCAATTCCTGATGTTCTACAGTATATTTCTGTTTTAGAACATTTGAATGTTTCTTTTAACATGTTGGAGGGTGAAGTACCAATCAAAGGTGTCTTTCGAAACTCAAGTAGGTTTATGGTGATGGGAAACAATAAGCTATGTGGAGGTATTTTGGATCTGCATCTACCATCATGCCATGTCCATGGTATCAAATCTGCAAGACCTCGCAATTTCCTATTGATAGCAGTGATAGTTAGTGTAGTTTCTATTTTTCTAATACTATCATTTATAATAACTATCTACTGGATAAGGAAAAGAAACAAGAAGTCATCTTCTGATTCACCAACAATTGACCATCTTGCTAAGGTTTCCTACAAGGATCTAAATCACGGAACCAATGGGTTCTCATCTACAAACTTGATCGGATCAGGAAGTTTCGGTTCTGTGTACAAAGCAAACCTAATGTTAGAAAGTAAAGATTTTGCTGTAAAGGTTCTGAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCATCACCGAGTGTAATGCATTAAAAAATGTTAGACATCGAAATCTGGTAAAGATTCTAACATGTTGTTCAAGTATTGATAACAAAGGTGAAGAATTTAAAGCTCTAATTTTTGAGTACATGAAAAATGGAAGCTTAGAAGAATGGCTACATCCAAGAATAGGAAGTGTAGATCAGCTTCCTAAAACGTTGGACCTTCATAAAAGATTAAATATTATTATCGATGTTGCTTCTGCATTACATTATCTACATTGTGAATGTGATCGATTGGTTATTCACTGTGATCTCAAACCAAGCAATGTCTTTCTCGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCATCTATTAACGGTGCCTTTCATGAGGAAACTAGTACAATTGGAATAAAAGGGACTGTCGGCTATACTCCTCCAGAATACGGAATTGCTTCCGAAGTGTCTTCATATGGTGACATGTATAGCTTTGGAATACTTATGTTGGAAATACTTACCGGAAGAAGACCCACGGATGAAATATTTGAGGAAGGTCAAAATATGCATAACTTTGCTGCATTTTCGTTTCCTAATAATCTTATACAGATTTTGGATCCACAACTTGTACCAAGAGATGAAGCACAATTAATAGAAGATGGAAACAATGGGAATCTTATTCAACCTATAGTGAAGTGCTGTGTTTCACTTTTTAGGATTGGACTTGCTTGTTCGATAGAATCACCAAAAGAAAGAATGAAAATAGTGGAGGTGACTAAAAAGCTAAACACAATTAGAAAGGACTTTCTCGCAGATTGGTAA 3042 0.3577 MFPTFSFWLYFILIFNLCPKQIAFALGNQTDHLALLKFKKSISNDPYRILDSWNGSTHFCNWRGITCNPMYQRVTKMKLPGYKLHGSLSSHIANLSFLRHLDLAENNLFGKIPQELGQLLELQQLYLTNNSFAGEIPTNLTNCFNLKYLYLRGNNLIGKIPIEIGSLQKLQELSVSGNNLVGGVPPFIGNLSFLTALSVSGNNLEGNIPQEICRLKNLTKISVGLNKLSGTFPLCLYNMSSMTMISATDNKLIGSLPPNMFNSIPNLKVFEMAVNQISGLIPTSVANASTLRKLDISKNYFVGQVPNLGRLKYLLRLNLEMNNLGDNSTKDLNFLKSLTNCAKLQLISISYNNFGGSLPNLVGNLSTQLSQLYFGGNQIYGQIPPELGNLNSLISLTMENNRFEGMIPDSFGKFQKIQVLDLSGNQLLGHIPAFIGNLSQMYFLSLAHNMLGQNIPPSLGSCQNLHHLNLSQNNLTGTIPLKVFSISSLSNSLDLSQNSLSGSLPIEVGRLKNINKLDVSENNLSGEIPITIGQCKSLEYLYLQGNSFHKIIPSSFASLKGLRYLDMSRNQLFGPIPDVLQYISVLEHLNVSFNMLEGEVPIKGVFRNSSRFMVMGNNKLCGGILDLHLPSCHVHGIKSARPRNFLLIAVIVSVVSIFLILSFIITIYWIRKRNKKSSSDSPTIDHLAKVSYKDLNHGTNGFSSTNLIGSGSFGSVYKANLMLESKDFAVKVLNLQKKGAHKSFITECNALKNVRHRNLVKILTCCSSIDNKGEEFKALIFEYMKNGSLEEWLHPRIGSVDQLPKTLDLHKRLNIIIDVASALHYLHCECDRLVIHCDLKPSNVFLDDDMVAHVSDFGIARLVSSINGAFHEETSTIGIKGTVGYTPPEYGIASEVSSYGDMYSFGILMLEILTGRRPTDEIFEEGQNMHNFAAFSFPNNLIQILDPQLVPRDEAQLIEDGNNGNLIQPIVKCCVSLFRIGLACSIESPKERMKIVEVTKKLNTIRKDFLADW* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0119 1013 SMART serkin_6 702 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0119 1013 Gene3D Ribonuclease Inhibitor 311 636 IPR032675 -
Mal6g0119 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Mal6g0119 1013 Gene3D Ribonuclease Inhibitor 28 310 IPR032675 -
Mal6g0119 1013 PANTHER OS04G0122200 PROTEIN 18 1010 - -
Mal6g0119 1013 Pfam Leucine rich repeat 537 596 IPR001611 GO:0005515
Mal6g0119 1013 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Mal6g0119 1013 Pfam Leucine Rich Repeat 145 165 IPR001611 GO:0005515
Mal6g0119 1013 Gene3D Transferase(Phosphotransferase) domain 1 784 1011 - -
Mal6g0119 1013 Gene3D Phosphorylase Kinase; domain 1 665 783 - -
Mal6g0119 1013 SUPERFAMILY L domain-like 29 324 - -
Mal6g0119 1013 PANTHER LRR RECEPTOR-LIKE KINASE 18 1010 - -
Mal6g0119 1013 ProSitePatterns Protein kinases ATP-binding region signature. 708 731 IPR017441 GO:0005524
Mal6g0119 1013 SUPERFAMILY Protein kinase-like (PK-like) 675 1002 IPR011009 -
Mal6g0119 1013 SUPERFAMILY L domain-like 367 622 - -
Mal6g0119 1013 Pfam Protein kinase domain 704 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0119 1013 SMART LRR_typ_2 95 119 IPR003591 -
Mal6g0119 1013 SMART LRR_typ_2 559 582 IPR003591 -
Mal6g0119 1013 SMART LRR_typ_2 511 535 IPR003591 -
Mal6g0119 1013 SMART LRR_typ_2 438 462 IPR003591 -
Mal6g0119 1013 SMART LRR_typ_2 390 413 IPR003591 -
Mal6g0119 1013 SMART LRR_typ_2 536 558 IPR003591 -
Mal6g0119 1013 SMART LRR_typ_2 167 191 IPR003591 -
Mal6g0119 1013 ProSiteProfiles Protein kinase domain profile. 702 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0119 Mal-Chr6 1751763 1755033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0119 28 1009 Receptor kinase-like Gene Family AT3G47570 44.165 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal6g0119 Pkinase 7.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0119 - - gmx:100778093 1257.66