Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0081 ATGCCTTCACTACTCACAGGCACACATCAATATCATTACTTACTTCCTCCTTCAACCTCTCACCACCGTTATCACAACCGTCACCGCCACCACAAACCTCTTATCACATCCTCCTTCCAAAACCGCCACCATTTCACCCTCTCCTCTTCCAAACGCATTCTCTTATCATCTCCAGTAAAATCATCCTCCATCAATGAAGTTTCAATCCACAACAATCCAGAATCAACTTCCAATGCTTCTAATGAGTTTCTTGACAGAATACGCAAATGGGTTTCTTTCCTTCCTTCCATTTTCCCTGGAGGAACATGGTGGAACTTCTCCGATGAAGTTGAGGTTTCAATCTTCAATCAACCCGTTACCGTGTGGTATGCTTTGGGCAAAATGTGGAACCTCGTTGCAAAAGATAGATGGGTCATTTTCGCTGCTTTCTCTGCTCTTATCATTGCAGCAGTTTCGGAGATTTCTATACCGCATTATTTGACAGCTTCGATATTCTCGGCGCAAGGTGGGGATATTAAAGTTTTTCATGGGAATGTCCGTTTGTTGATTCTCTTGTGTGTTACTTCTGGAATTTGCAGTGGGATACGAGGTTGCTTTTTTGGCATTGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTCTTCTTCAGGATATATCATTTTTTGACAATGAAACAGTAGGTGATTTGACAAGTAGACTTGGGGCAGATTGTCAGCAAGTTTCAAGGGTTATTGGAAATGATCTTAATTTGATATTGCGCAATGTCCTTCAGGGTGGAGGTTCATTAATCTACTTGTTGGTTTTGTCTTGGCCACTTGGTTTATGTACGTTGGTGATATGCTCCATATTAGCAGCGGTCATGTTACGTTATGGATGGTACCAGAAGAAGGCAGCAAGGCTGATCCAAGAAGTCACTGCTTCTGCTAATAATGTAGCTCAAGAGACATTCTCTCTTGTTAGAACTGTTCGAGTTTATGGAACCGAAGAAGAAGAACACGGGAGGTACAAATGGTGGCTGGAAAAATTAGCTGACATAAGCTTGCGACAAAGCGCTGCATATGGATTTTGGAATTTCAGCTTCAACACTCTTTATCATTCAACTCAGGTTATTGCTGTGCTATTTGGAGGAATGTCAATTCTAGCGGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATATAGTGAATGGTTAATTTATTCAACTTGGTGGGTGGGAGACAATATATCCAATTTGATGCAATCAGTTGGAGCTAGTGAAAAGGTTTTCAACTTAATGGATCTGTCACCTAGCAGCCAATTCATAACAGAAGGAGTAAAGTTGCAAAGTTTAACAGGGCATTTGGAATTTGTAAATGTATCTTTTCACTATCCTTCAAGGCCAACGGTATCTGTAGTGCAACATGTAAACTTTGTTGTCAATCCTAATGAGGTGGTTGCCATTGTTGGTCTTAGTGGTAGCGGGAAAAGCACATTGGTGAATCTTTTGCTCCGTCTCTATGAGCCTACAAGTGGTCAGATTTTGATAGATGGTGTCCCTCATAAAGACTTGGATGTTATGTGGTGGAGAGAGAGAATCGGATATGTAGGACAGGAACCGAAGCTATTTCGGATGGATATTAGCTCAAACATCAGATATGGATGTACTCGAGATGTAAAGCATGAGGATGTTGAGTGGGCTGCGAAGCAGGCCTATGCTCACGACTTTATCTCTGCACTTCCTAATGGTTATGGAACACTTGTTGATGATGATCTTTTGAGCGGGGGACAAAAGCAGCGAATTGCCATTGCCAGAGCTATTCTTAGGGACCCGAAAATATTGATTCTTGATGAAGCCACTAGTGCACTGGATGCTGAAAGTGAACATAATGTGAAGGGTGTTCTTCGATCGGTTAGAAGTGATTCTGCGTCAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACCATACAAGCTGCCGACAGGATTGTGGTGATGGATAGGGGTCAAATTGTTGAGATTGGAAGTCACAGGGAACTTCTCTTGAAAGATGGTTTATATGCTCGGTTGACTAGAAAACAGGCTGATACCATGGAATGA 2103 0.417 MPSLLTGTHQYHYLLPPSTSHHRYHNRHRHHKPLITSSFQNRHHFTLSSSKRILLSSPVKSSSINEVSIHNNPESTSNASNEFLDRIRKWVSFLPSIFPGGTWWNFSDEVEVSIFNQPVTVWYALGKMWNLVAKDRWVIFAAFSALIIAAVSEISIPHYLTASIFSAQGGDIKVFHGNVRLLILLCVTSGICSGIRGCFFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGGGSLIYLLVLSWPLGLCTLVICSILAAVMLRYGWYQKKAARLIQEVTASANNVAQETFSLVRTVRVYGTEEEEHGRYKWWLEKLADISLRQSAAYGFWNFSFNTLYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFNLMDLSPSSQFITEGVKLQSLTGHLEFVNVSFHYPSRPTVSVVQHVNFVVNPNEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILIDGVPHKDLDVMWWRERIGYVGQEPKLFRMDISSNIRYGCTRDVKHEDVEWAAKQAYAHDFISALPNGYGTLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSASRRSVIVIAHRLSTIQAADRIVVMDRGQIVEIGSHRELLLKDGLYARLTRKQADTME* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0081 700 SMART AAA_5 482 671 IPR003593 -
Mal6g0081 700 PANTHER ABC TRANSPORTER B FAMILY 79 699 - -
Mal6g0081 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 447 695 IPR027417 -
Mal6g0081 700 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 140 421 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g0081 700 CDD ABC_6TM_TAP 142 429 - -
Mal6g0081 700 Pfam ABC transporter transmembrane region 142 406 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g0081 700 Gene3D ABC transporter type 1, transmembrane domain 123 440 IPR036640 GO:0005524|GO:0016021
Mal6g0081 700 Coils Coil 689 700 - -
Mal6g0081 700 Gene3D - 445 700 IPR027417 -
Mal6g0081 700 SUPERFAMILY ABC transporter transmembrane region 127 437 IPR036640 GO:0005524|GO:0016021
Mal6g0081 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 455 694 IPR003439 GO:0005524
Mal6g0081 700 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 79 699 - -
Mal6g0081 700 Pfam ABC transporter 474 621 IPR003439 GO:0005524
Mal6g0081 700 ProSitePatterns ABC transporters family signature. 593 607 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0081 Mal-Chr6 1207131 1214633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0081 210 700 Calmodulin-binding Proteins AT2G36910 34.400 1.90e-72 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0081 - - gmx:100813359 1100.5