Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0078 ATGGAGGAAGCACTTAACCGTCTCAACGGAACACCCTCAACCATCCAAGAATCTGAAACCAAAAAACCAAACAAACGCACTTCACGCCAAAACACCGCCTCCGCTGCTGCTGGCAGCGGAGGCGGTACTAACCGCTACCGCGGAGTTCGCCGCAGACCGTGGGGCCGTTATGCAGCTGAAATTAGAGACCCTCAGTCCAAAGAACGCCGCTGGCTTGGTACTTTTGACACAGCTGAAGAAGCTGCTTGTGCTTACGACTGTGCCGCACGTGCCATGCGTGGTCTCAAAGCTCGCACCAACTTTGTTTACCCTACTTCTCCTCCTCCAAACACCACTTTTCCTTCTTTCAACTTCACAAAAAATTCTCAAGCTTTTGAAAAAACTGCTACACATAACCGCCACGTGGCGTCTTGTGGTTGGTCAGAATCACAAGGTGTTGATTTTACTCACCAAAGAAACCCTTCAACTTCTTCACTTGACATGCTTCTGTTTCGTGAATTCATTAACTCTTCGAATTCCAAACCTTCTTTGGTTTCTTCTTCTCCTCAGAATCACTTCCACGACCAGTATTCTAGTTCTAGTACTAGTTCTGTTTCTGGTTCTGGTTCTACTTTTCACGCAGGTTGTTGTTTGGGGAATTCTTGCGGAGGGGGTGCAAATAGCAACCATCACAACACTTTTGTTGGTTCAAAAGTTTCTGCTGATGAAGACTTTGAGTTTTTTCCTAAAGAATCTTCTGATTCTGGATTATTGGAAGAGATTGTTAACAGGTTTTTACCGAAACCTAAGCAAGAGATTAAGACGGAGATTTTGCCAAAGACAGCAACTTTCTGCGACCCTTTTGTTCCTGCACCTGTGTATTATCAAAATGGTGTTGGGTTTGATCAAAATGGTCTAAATATGCAGCAGTTTGAGAATTTTAATAATGGGTTTAATAGCACTTTTCATTCTCTGCCTACTCATGGAAATGAACAGATTATGGCGAATCATGCTGAGAATTCTGTTATTCAGTATCAAGATCTTCTTAATGCTTTTGCACTAAGGATGCAGAATGCTTAA 1059 0.4325 MEEALNRLNGTPSTIQESETKKPNKRTSRQNTASAAAGSGGGTNRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSPPPNTTFPSFNFTKNSQAFEKTATHNRHVASCGWSESQGVDFTHQRNPSTSSLDMLLFREFINSSNSKPSLVSSSPQNHFHDQYSSSSTSSVSGSGSTFHAGCCLGNSCGGGANSNHHNTFVGSKVSADEDFEFFPKESSDSGLLEEIVNRFLPKPKQEIKTEILPKTATFCDPFVPAPVYYQNGVGFDQNGLNMQQFENFNNGFNSTFHSLPTHGNEQIMANHAENSVIQYQDLLNAFALRMQNA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0078 352 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 352 - -
Mal6g0078 352 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Mal6g0078 352 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Mal6g0078 352 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Mal6g0078 352 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 352 - -
Mal6g0078 352 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Mal6g0078 352 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Mal6g0078 352 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Mal6g0078 352 MobiDBLite consensus disorder prediction 1 50 - -
Mal6g0078 352 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Mal6g0078 352 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0078 Mal-Chr6 1132384 1133442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0078 1 274 AP2-EREBP Transcription Factor Family AT1G24590 39.310 5.64e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal6g0078 AP2 2.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0078 - - gmx:102669715 258.455