Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0045 ATGGCGTTGCTAGAGCTTGGGAAGAAGAGAATATATATGAACTTTGCCAGAGCTTTGGCTTCAACGCCATGTAGGCATGTGGTAGGGTCAAGTTTTGCATCTATATTTGCTTCACAATCTGTTTATGCATCAGCAAGATGCATGCCTGATTTCATCAATCACTCATGTATAGGTGCGGCTGGTTTCAGTAGCGGGACTAAAGAATGTGGAATACGGTGCTTCCATGCAAGCTCACAAGTCTGGGCAAGGAGTGATGCGGCATATGGTTTGAAGGCCCCAAAGAAGGAGAAGTATGTGAGAAGAGGCAACCAGCCTCCTGTTGACGCTCCACACGTCCCTCGTAAAGTCACGGCAACCAAATCTAATCCCGATAAAACGATAGAAATATTTGAAGGCATGACCCTTGTTGAACTGGCAAAGCGTTCTGGAAAATCAGTATCTTCTTTGCAAGATATTCTCACAACTGTCGGTGAAAAGATTGAATCAGAGTTTGATCCTCTCAGTATGGATATTTCCGAGCTTGCTGCAATGGAAGTTGGCGTCAATGTTAAGAGGTTACATTCAACTGAAGGTAAAGAAGTTTTACCACGTCCTCCAGTTGTAACAGTGATGGGTCATGTTGATCACGGCAAAACTTCCCTTCTTGATGCCTTGCGTCAAACGTCAGTGGCAGCCAAGGAGGCTGGTGGCATTACTCAGCATCTAGGTGCCTTTGTGGTGGGCATGTCATCAGGAGCATCAATCACATTTCTTGACACTCCTGGTCACGCTGCATTTAGTGCCATGCGGGCAAGAGGTGCAGCAGTCACAGATATAGTAGTGCTAGTTGTTGCTGCAGATGACGGTGTAATGCCCCAAACACTTGAAGCTGTGTCCCATGCAAAATCAGCTAATGTACCAATTGTAGTTGCAGTCAATAAATGTGATAAACCAGGTGCAAATCCTGAAAAAGTAAAACTACAGCTTGCTTCGGAGGGCTTGCTGCTAGAGGAGATGGGTGGGGATATCCAGGTTGTTGAAGTTTCCGCGATTAAAAAGACTGGACTGGATAACCTAGAGGTAGCTTTACTCCTTCAGGCTGATATGATGGATCTTAAAGCACGAATTGATGGTCCTGCTCAAGCATATGCGATTGAAGCAAGACTTGACAAAGGACGGGGTCCATTGGTGACTACTATAGTGAAGGCAGGGACTCTAGTTTGTGGACAGTATGTGGTTGTAGGCTCGCAGTGGGGAAGAATAAGGGCTATTAAAGATGCAGCAGGGAGGTTAACTCAACAAGCAACTCCGGCAATGCCTGTTGAGATTGAAGGGCTTCGAGGGCTGCCAATGGCTGGTGACGATGTCATTGTTGTTCATTCTGAGGAGCGAGCTAAAATGCTTAGTTCTGGTAGGAAAAAGAAATCTGAAGAGGACAGGCTTAGGGGCAAGATAGTGCAGAATATCCCAGCCACTTCAGATGATACTGAGGAGGTTCCGAAGAGGGTTGAAATGCCAGTTATTGTAAAAGCAGATGTTCAGGGAACTGTTCAAGCCGTTGCAGATGCATTAACAACTTTAAATAGTCCTCAGGTTTCTGTGAATATTGTCCATGTTGGCGTGGGGCCTATTTCTCAATCTGACGTGGACCTAGCACGGGCTTGCGGTGCATGCATAGTTGGATTCAATGTCAAGGCTCCACCTAATTCTCTTAGCCAGGCAGCAACTCGTGCTCGTATCAAGGTAATTATGCACCGTGTGATTTACCACGTATTGGAAGACATAGCCAATTTGATAATAGAGAAGGCCCCAGGTACTCCCGAGACTCAGGTAGCCGGGCAAGCGGAAGTGCTAAATATCTTTGAAGTGAAAGGCAGCAAATCTAAGGGACCTGATAAGAAAATTGCTGGTTGTAAAGTTGTTGAAGGTTTTGTGAACAAGTCAGCAACCATGAGGCTTCTAAGGAGTGGTGAAGTGGTGTTTGAAGGACCTTGTTCGTCTCTTAAGAGGGAGAAGCAGGATGTGGACTCTGTGAAGAAGGGAAATGAGTGTGGACTAGTAATCGGTGACTGGTATGATTTTCAAATTGGTGATGTTATCGAGTGCCTAGAACAAGTAGTTAGGAAGCCCAAGTTTGTTAAATCGGAGAGCGGCGCTGTTCGAATAGAGTGCTGA 2154 0.4578 MALLELGKKRIYMNFARALASTPCRHVVGSSFASIFASQSVYASARCMPDFINHSCIGAAGFSSGTKECGIRCFHASSQVWARSDAAYGLKAPKKEKYVRRGNQPPVDAPHVPRKVTATKSNPDKTIEIFEGMTLVELAKRSGKSVSSLQDILTTVGEKIESEFDPLSMDISELAAMEVGVNVKRLHSTEGKEVLPRPPVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVGMSSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAVSHAKSANVPIVVAVNKCDKPGANPEKVKLQLASEGLLLEEMGGDIQVVEVSAIKKTGLDNLEVALLLQADMMDLKARIDGPAQAYAIEARLDKGRGPLVTTIVKAGTLVCGQYVVVGSQWGRIRAIKDAAGRLTQQATPAMPVEIEGLRGLPMAGDDVIVVHSEERAKMLSSGRKKKSEEDRLRGKIVQNIPATSDDTEEVPKRVEMPVIVKADVQGTVQAVADALTTLNSPQVSVNIVHVGVGPISQSDVDLARACGACIVGFNVKAPPNSLSQAATRARIKVIMHRVIYHVLEDIANLIIEKAPGTPETQVAGQAEVLNIFEVKGSKSKGPDKKIAGCKVVEGFVNKSATMRLLRSGEVVFEGPCSSLKREKQDVDSVKKGNECGLVIGDWYDFQIGDVIECLEQVVRKPKFVKSESGAVRIEC* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0045 717 TIGRFAM small_GTP: small GTP-binding protein domain 199 351 IPR005225 GO:0005525
Mal6g0045 717 Gene3D - 493 598 IPR036925 -
Mal6g0045 717 CDD IF2_mtIF2_II 372 467 IPR044145 -
Mal6g0045 717 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 492 605 IPR036925 -
Mal6g0045 717 Pfam Elongation factor Tu GTP binding domain 201 353 IPR000795 GO:0003924|GO:0005525
Mal6g0045 717 SUPERFAMILY Translation proteins 370 452 IPR009000 -
Mal6g0045 717 Gene3D Translation factors 369 482 - -
Mal6g0045 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 362 IPR027417 -
Mal6g0045 717 Hamap Translation initiation factor IF-2 [infB]. 8 703 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mal6g0045 717 TIGRFAM IF-2: translation initiation factor IF-2 125 701 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mal6g0045 717 CDD IF2_eIF5B 199 363 - -
Mal6g0045 717 CDD mtIF2_IVc 606 695 - -
Mal6g0045 717 Gene3D - 194 368 IPR027417 -
Mal6g0045 717 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 73 708 IPR015760 -
Mal6g0045 717 PANTHER TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL 73 708 - -
Mal6g0045 717 Gene3D Translation factors 601 702 - -
Mal6g0045 717 SUPERFAMILY Translation proteins 601 702 IPR009000 -
Mal6g0045 717 Pfam Translation-initiation factor 2 489 588 IPR023115 -
Mal6g0045 717 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 196 366 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0045 Mal-Chr6 569147 573545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0045 187 681 Eukaryotic Initiation Factors Gene Family AT1G76810 26.998 2.23e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0045 K02519 - gmx:100781314 1151.35