Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0043 ATGGCTCTTCCTGGTTCCCTGCAACTGTCTCATGGATTGGGACTTTGCAGGAACCTGAGTTGCAATAAAGATCAGATGGTAAAGGGAAGATGCAAGATGCAGTTATTCAATGCATGCCCTTCGTATCCTGTTTCGTTCATAAAACAGGACTACAGGGGTCTTCGACACCTCCATCATATAAACAGGTCAACACATAGATTGTCTCGCAAATCACGCTCTTTTAAATGTCATTGTTTTTTAGTGCCAGGCGAACGAATTGCGCTTCCTTCTGCTAAGGTGGCTACTACAGTGCTGACAAGGTGCTGTAATGTGTTACAAAATAGTCCAGTCATTGTAAAGTTGATTCCTGCTGTTGGCATTATCATTTTTGCAGTATGGGGAGTTGGTCCATTAATGTTTCAGATAAGGAAACAGTTTTTTAAGAGGAGTGATAATAGTTGGAAAAAAAGTACCACTCATTACATAGCAACTTCATACCTTCGACCACTACTGTTATGGACTGGAGCCATACTTATTTGCAGAGCATTTGAGCCAGTAATTCTACCTACGGAAACTAGCCAGGCTATTAAGGAACGACTTCTGAATTTCGTTAAATCATTGTCGACTGTAGTGGCTTTTGCCTATTGTTTATCAAGTGTAATTCAACAAGCACAGAAATTTGTAACAGAGAATGCAGATGCAAGCGAGACAAGAAATATGGGATTCCAATTTGCAGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCTTTTTCATTGTTTATGGAATTGCTGGGCTTTTCTACTCAAAAATGGGTTACAGCAGGAGGTTTTGGGACAGTCTTGTTGACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCGCGATGATTCATGCAACTCGACCTTTTGTGGTAAATGAATGGATTCAAACGAAGATTGAAGGATATGAGGTGTCTGGCACTGTTGAGCATGTTGGTTGGTGGTCACCAACAATTATACGAGGCGAAGATCGTGAAGCTGTACATATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTCACTCAAAAAACACATTGGAGAATCAAAACGCACCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGCGGAAAGTATTAGCAAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAATATAAACCCTGAAAATCAGGCTCTTATGATTCTGATTTCTTGCTTTGTCAAGACCTCACATTTTGAAGAATATTTGTGCGTTAAGGAAACTATACTATTGGATCTTCTTAGAGTTATCAGCCATCACCGGGCCCGGCTTGCAACACCAGTCCGTACCCTGCAGAAAATATATGCTGATGCCGACTTGGACAACATACCATACGCAGATTCTACATTTAATGGTGCTGGAACAGTATCTAACCGTCCATTGTTAGTGATTGATTCTCCTTACAAGAACAATGCAGATGATAAAACGAAAAGTCGATCAACACGTGCAACTGTTGATCAAGATGACAAGACAACTGTGCGGACTAAACTCGATACCAAGACAGACGATAAGGTTGAACCAATCGTAGCACCAGATACTAAGGTTAGAGGAACTCAAGATGCATCTGAGGTGGATGCCAAAGTCATGGCATCTGACTCTGATGTGAGTGAAAACAAGTCACTAAAATCAAATTTAAGCAAGGCAAACGTGGAGGTGCCGGAATTGTCTTCTAATTCTAACTCCAAAGTAACTGGTTCAGAAGTAGATAATTCAACCATGAAGGACATCCATGTCAAACAATCCAAGGGTCAAACAATTAAAAACACCAAGCCAAACGCCGACTCAGACAATCTAGTTTCCTCATCAACGAACAACACCGACAAAGCCAATGGCAATATGCCTACAAAACAGCAAGGAGAAAAGAAACCTGCTGCATCCAGGCCTGTTCTTGAAGAGAATATAGTACTAGGTGTTGCATTGGATGGATCAAAGAGGACACTTCCTATTGATGAGGGGATTGACACTGTAACAACTCAAGAGGCAAAGGAAATGGCTTCATTCCAGGGTGGAAATGGATCTCCAAAAGCTTCAGATGGGAATGTAAAGTAA 2127 0.41 MALPGSLQLSHGLGLCRNLSCNKDQMVKGRCKMQLFNACPSYPVSFIKQDYRGLRHLHHINRSTHRLSRKSRSFKCHCFLVPGERIALPSAKVATTVLTRCCNVLQNSPVIVKLIPAVGIIIFAVWGVGPLMFQIRKQFFKRSDNSWKKSTTHYIATSYLRPLLLWTGAILICRAFEPVILPTETSQAIKERLLNFVKSLSTVVAFAYCLSSVIQQAQKFVTENADASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGFGTVLLTLAGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALMILISCFVKTSHFEEYLCVKETILLDLLRVISHHRARLATPVRTLQKIYADADLDNIPYADSTFNGAGTVSNRPLLVIDSPYKNNADDKTKSRSTRATVDQDDKTTVRTKLDTKTDDKVEPIVAPDTKVRGTQDASEVDAKVMASDSDVSENKSLKSNLSKANVEVPELSSNSNSKVTGSEVDNSTMKDIHVKQSKGQTIKNTKPNADSDNLVSSSTNNTDKANGNMPTKQQGEKKPAASRPVLEENIVLGVALDGSKRTLPIDEGIDTVTTQEAKEMASFQGGNGSPKASDGNVK* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0043 708 MobiDBLite consensus disorder prediction 688 708 - -
Mal6g0043 708 Gene3D - 193 297 - -
Mal6g0043 708 MobiDBLite consensus disorder prediction 559 645 - -
Mal6g0043 708 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 708 IPR045042 -
Mal6g0043 708 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Mal6g0043 708 Gene3D - 299 354 IPR023408 -
Mal6g0043 708 MobiDBLite consensus disorder prediction 493 654 - -
Mal6g0043 708 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 708 - -
Mal6g0043 708 MobiDBLite consensus disorder prediction 496 536 - -
Mal6g0043 708 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0043 Mal-Chr6 542247 548895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0043 9 704 Mechanosensitive Ion Channel Family AT5G10490 54.403 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0043 K22047 - gmx:100789444 1071.23