Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0032 ATGGATTCAACACCAAAAGAGAAAATATATGTTGCTGTTGGTGATGATGCACAAGATGGATTTAATACTTTGAATTGGGCTCTCAAGAAATGGAATTCTCATCCAATTTCCATTGTTATTCTACATGTCACTCATAACATTTCTAAGGATTATGTTTATACACCATTTGGGAAACTTCCAGCAAGATCTTTGAATGATGAGAAACTTGAAGCTCTAAGAAAAGATGAGAAAGAGAGAATCAAGAAGCTGTTTTCCAAATATATTGCTTTCTGTGGCAAGGTGTCAGCAGAAATCATTGAAGTTGAGAAACTTGACGAGCCTATGCAAAAGCGCGTCATAGACTTGATAACCGGGCTTGGAATTACCAAGTTAGTCATGGGATTTTCATTCATGAAGCCTTCCTTGAAATCAAAAGGTGCTATAAGTGGATTATTCTATGTTCATCAACACAAGCCTAGTTTATGTGAATTATTCATTATATGTGGTGGCAAACAAGTTTTTCTAAGGGGAAACAATGATGAGAAAATCATGGAGGATGATAGTGGAGTTATGGTTGCTAAAATGAGAGATAAGGTAACTTTTAAAGATTGGTTAGACAAAATGTTCAGTGACAAAACAAATGATTATTCTATGAATAGATTAAGTGCATCTCCTTCATCAACCAATTTAGTCCAAAATCAATGGGAGTTTTATCTTCAAGACATAGAAAATTATTATCAAGAGTTGTTATCTTCAAATTTGGAGGAAGGAAGCTACGTGCAGGACAATGGTGGCTCGCACGTTTGTCCAAAAATTGAGCCTTACGTCACTGAATTGAACAATTCTAATAAGAGTACTACGGAAAAAATTGAGATGCTGAAAAATAAGCTAAATGAAGCTCACAAAACCATTGAGTTGAAGAAGAAAGAGGCTAAGGAAAATATAGAGAAACGGACAAAAGCTGAATGGGCAATTAGCTTATGCAACAGCAGGGCTGAAGAAATTGAAGGTAGAATAAGGGAAGAAGTGAGTACAAAGGAGAACCTAAACAAGGAATTACAATTGGAGAAAGAGCAAAGAGAAGAAATGAGAACAGAGATTAAAGAAAAAAAACAAAGGATGAATTCATTGGTAGAGCTTCAATCAGAGCTATCAAACAAGCTTCAAATGTCAACAATGGCAAGATCAAGAGCAGAGACACAAGTAGAGAGAGCAGTGAGGGAGAGAACCGAAATGGTGAGGGAGATCGAGGAATTGAGGAAGCAGAGAGATGTGTTGAATAGAAGGATTGAGTTTTGCAAGCAGAAAGATGCCATAGGCATGGCTGCGAGGCTGAGCGACAACATCGCGAGTTGTGGGATGAGGGAGTACAGCGAGGAGGAGCTGAGGTTGGCGACTGATAATTTTTCGGAGCGGTTAAGGTTGAAGTCTGGTGGGGACTGGACTAATGTGTATAGAGGACGGTTCAACCATTCCACTGTTGCAATTAAGATGATGTCTTCTTTTGCTTCTTTGTCCCAAGAGGATTTTCAATCCAAGGTGAGGTTTCTTGGTGATATTAGGCAACCCCATGTAGTTGCTATGGTGGGCTTCTGCTCCAAGCCCAAATGCATAATTTTGGAATACATGAGCAATGGAAGCTTACAAGACATGTTGTTTTCTAGGAGAAGAAACCGGGGCTTACGGTGGCACGATCGAATACGAATAGCGACCGAGGTTTGCTCGGGCCTGGGCTTTCTTAATTCATCTCCGCAAAGGCCCGTTGTTCATTGTCACTTGAGCCCAGCCCACATCCTCCTAGACCGGAATTTAGTTGCAAAAATCACGGGCTTTGGGTTTCAAGAGTGCGATGATGACGAGGAATGCAACGCCGAGTCAGATTTGTGGGCCGTAGGGGTTTTATTGATGCAACTTTTGACTGGAAGAAATTGGGCCAGGCCCATTGAGGAGCCCATGACAGTAGATATGGATAGAGAGACTTTGGTTAACATTCTTGATGACATGGCTGGACAATGGCCATTGGATCTAGCAAAAGAACTTATGGGCCTGGCTATGATTTGCATGTCTGTGAAAACCAAGCCCAGCCCAAATCTAAGCATTGCAAGGGTCTTAGAGGAACTTAATAAGATAAGAAGAAAGGGTGATGAAATAGTTGCAAAGGAAGATAGAAAGGTAATCATTGGTGGATGCACAGATAGAGAGGGCTCTAGTGATGTTCCTAGTGTTTTCCTTTGCCCTATACTTCAGGAGGTAATGAAAAATCCACACGTGGCAGCAGATGGATTTTCTTATGAGCTGGAAGCAATAGAACAGTGGTTGCATTCAGGACATGATACATCACCTATGACAAATTTAAGACTGAAGCACACATCCCTTACACCAAATCACATACTCCGTTCCTTCCTTGAGGAATGGCAGAGCAACAAATCAGCTAAAATTGCAAATTAA 2427 0.4059 MDSTPKEKIYVAVGDDAQDGFNTLNWALKKWNSHPISIVILHVTHNISKDYVYTPFGKLPARSLNDEKLEALRKDEKERIKKLFSKYIAFCGKVSAEIIEVEKLDEPMQKRVIDLITGLGITKLVMGFSFMKPSLKSKGAISGLFYVHQHKPSLCELFIICGGKQVFLRGNNDEKIMEDDSGVMVAKMRDKVTFKDWLDKMFSDKTNDYSMNRLSASPSSTNLVQNQWEFYLQDIENYYQELLSSNLEEGSYVQDNGGSHVCPKIEPYVTELNNSNKSTTEKIEMLKNKLNEAHKTIELKKKEAKENIEKRTKAEWAISLCNSRAEEIEGRIREEVSTKENLNKELQLEKEQREEMRTEIKEKKQRMNSLVELQSELSNKLQMSTMARSRAETQVERAVRERTEMVREIEELRKQRDVLNRRIEFCKQKDAIGMAARLSDNIASCGMREYSEEELRLATDNFSERLRLKSGGDWTNVYRGRFNHSTVAIKMMSSFASLSQEDFQSKVRFLGDIRQPHVVAMVGFCSKPKCIILEYMSNGSLQDMLFSRRRNRGLRWHDRIRIATEVCSGLGFLNSSPQRPVVHCHLSPAHILLDRNLVAKITGFGFQECDDDEECNAESDLWAVGVLLMQLLTGRNWARPIEEPMTVDMDRETLVNILDDMAGQWPLDLAKELMGLAMICMSVKTKPSPNLSIARVLEELNKIRRKGDEIVAKEDRKVIIGGCTDREGSSDVPSVFLCPILQEVMKNPHVAADGFSYELEAIEQWLHSGHDTSPMTNLRLKHTSLTPNHILRSFLEEWQSNKSAKIAN* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0032 808 Pfam Protein tyrosine and serine/threonine kinase 472 607 IPR001245 GO:0004672|GO:0006468
Mal6g0032 808 Gene3D Transferase(Phosphotransferase) domain 1 611 723 - -
Mal6g0032 808 Gene3D Transferase(Phosphotransferase) domain 1 537 610 - -
Mal6g0032 808 Pfam U-box domain 732 803 IPR003613 GO:0004842|GO:0016567
Mal6g0032 808 Coils Coil 388 429 - -
Mal6g0032 808 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 5 801 - -
Mal6g0032 808 SUPERFAMILY RING/U-box 727 803 - -
Mal6g0032 808 ProSiteProfiles U-box domain profile. 731 805 IPR003613 GO:0004842|GO:0016567
Mal6g0032 808 ProSiteProfiles Protein kinase domain profile. 463 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g0032 808 Gene3D Phosphorylase Kinase; domain 1 434 536 - -
Mal6g0032 808 Coils Coil 269 307 - -
Mal6g0032 808 PANTHER OS02G0152300 PROTEIN 5 801 - -
Mal6g0032 808 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 730 807 IPR013083 -
Mal6g0032 808 CDD RING-Ubox_WDSUB1_like 736 777 - -
Mal6g0032 808 SUPERFAMILY Protein kinase-like (PK-like) 446 695 IPR011009 -
Mal6g0032 808 SMART Ubox_2 735 798 IPR003613 GO:0004842|GO:0016567
Mal6g0032 808 Coils Coil 325 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0032 Mal-Chr6 455065 460575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g0032 7 808 U-box Gene Family AT5G65500 48.645 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal6g0032 PK_Tyr_Ser-Thr 4.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0032 - - gmx:100786771 1208.36