Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5631 ATGGAAATAGATGATGAGGAGAGGGACGTTGAGCAACTAATAATATCAAGATCAGGATCATCATCTGCAGGATCTTCTGGTGGGCTAAGGCTGAGAGAGCCTCTTCTTGTGAAAAATAATAACAGACTCAATACTACTTCCCAACGTGCCATTGTTGGAGCCAATGTTTGTCCAATTGAAAGTCTCGACTACGAGATCATTGAAAATGATCTATTCAAGCAAGACTGGAGGTCTAGAGCAAAGGCTGAGATAGCCCAATATGCCATCCTCAAATGGACCTTTGCACTTCTCATCGGTTTAGGCACAGGACTTGTTGCCTTCTTCAACAACATTGGGATTGAGAATATTGCCGGTTTCAAGCTTCTCTTCACCAACCATCTCATGCTGAACCATAAGTATCATCAGGCCTTTGCAGTCTATGCTGGTTGTAACATGGTTTTAGCCATTGTTGCAGCAGCCCTCTGCGCCTACATTGCCCCTGCAGCAGCAGGATCTGGCATACCTGAGGTCAAGGCATATCTCAATGGCGTAGATGCTCCTTCTATATTGGCTCCAACTACCCTCTTTGTAAAGATTTTTGGTTCAATTTTCGGGGTTGCAGCTGGTTTTGTAGTGGGTAAGGAAGGACCTATGGTGCATACTGGTGCTTGCATAGCTAATTTACTTGGACAAGGTGGTTCCAAAAAATATAGAATGACATGGAAAGGGTTCAGACATTTTAAAAATGACAGAGATCGAAGGGATTTGATCACATGTGGTGCGGCTGCTGGTGTTGCTGGTGCCTTCCGTGCCCCAGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCTTGGTGGAGGAGTGCTCTTTTGTGGCGGACATTTTTCACTACAGCTGTAGTAGCTGTAGTGCTTAGAGGTTTCATGGAATATTGCAAGGGTGAAAACTGTGGTCTTTTTGGGGAAGGAGGTTTGATAATGTTTGATGTTAATTCTGTAAAGCCTGCATACAGCATACCTGATTTACTAGTAGTTATATTTCTTGGAGTTATTGGAGGTCTTTTGGGAAGCCTTTACAATTATCTCGTGAATAAGGTCCTTCGAACTTACAACATCATTAATGAGAAAGGCCCCATATTTAAAATAATACTCGTGATGATTATATCATTCTTGACCTCTTGTTGTTCATTTGGGGTTCCATGGCTATCAAAATGCATCCCTTGTCCTCCTCATGTGGGGGATCAGTGCCCAACCGTAGGGCACTCCGGACACTACAAGAATTTCCAGTGTCCTCCTAATCACTACAACGACCTTGCCTCTCTCTTTTTTACTACCAATGACGATGCTATACGCAACCTCTTTATTGCTGGCTCTGACAAAAGATTCATGCTCTCCAGTCTCCTAATATTCTTTGTGGCAATCTACTTCCTCGGAATCATCACTTATGGCATTGCAATTCCGTCAGGACTATTTATTCCGGTGATACTTGCAGGGGCTTCATATGGTCGTGTTGCAGGAAGTCTGTTAAGTCCCTTTACAGTTTTGGATGTGGGTTTGTTTGCACTCTTGGGAGCTGCATCCTTCCTTGGTGGCACAATGAGAATGACTGTTTCTATCTGTGTCATACTTCTTGAACTCACCAACAACCTCCTCATGTTACCATTGGTCATGTTGGTTCTCCTCATCTCAAAGTCTGTGGCAGATTGTTTTAACAAAGGTGTTTATGATCAGATAGTAGAAATAAAGGGGTTGCCTTATTTGGAAGCACATGCAGAATTGTACATGAGGCAGTTAGTTGCGGGTGATGTTGTTTCTGGTCCACTGTTTACATTATCTGGGATTGAAAAAGTGGGAAATATTGTGCACGCTTTAAAGGTGACGCGACATAATGGATTTCCTGTGATTGATGAGCCTCCATTTTCAGATGCTCCAGAGTTATGTGGATTGGTTTTGAGGTCTCATTTGCTTGTAATTCTTAAACACAAGGCATTTGCGACGAAGCAAAGGGGGATGTCCTTGATTATGAACAAGTTGAGTGCACATGATTTTGGAAAGCCAGGTTCGGGGAAAGGGATAAGGCTGGATGATTTGGAGATATCAGAGGAGGAGATGGAAATGTATGTTGATCTGCATCCCATTACCAACAGGTCACCATATACAGTTGTGGAAACAATGTCTCTAGCTAAAGCTGCTGTTCTTTTCCGCGAGCTTGGCCTCAGGCATTTATTGGTCGTGCCAAAGACACCCGAAAGACCTCCAATTGTGGGGATCCTAACAAGGCATGATTTCATGCCGGAACATATATTGGGACTATACCCTCACTGCAACCCCACAAGTAAATAG 2325 0.4344 MEIDDEERDVEQLIISRSGSSSAGSSGGLRLREPLLVKNNNRLNTTSQRAIVGANVCPIESLDYEIIENDLFKQDWRSRAKAEIAQYAILKWTFALLIGLGTGLVAFFNNIGIENIAGFKLLFTNHLMLNHKYHQAFAVYAGCNMVLAIVAAALCAYIAPAAAGSGIPEVKAYLNGVDAPSILAPTTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYRMTWKGFRHFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFMEYCKGENCGLFGEGGLIMFDVNSVKPAYSIPDLLVVIFLGVIGGLLGSLYNYLVNKVLRTYNIINEKGPIFKIILVMIISFLTSCCSFGVPWLSKCIPCPPHVGDQCPTVGHSGHYKNFQCPPNHYNDLASLFFTTNDDAIRNLFIAGSDKRFMLSSLLIFFVAIYFLGIITYGIAIPSGLFIPVILAGASYGRVAGSLLSPFTVLDVGLFALLGAASFLGGTMRMTVSICVILLELTNNLLMLPLVMLVLLISKSVADCFNKGVYDQIVEIKGLPYLEAHAELYMRQLVAGDVVSGPLFTLSGIEKVGNIVHALKVTRHNGFPVIDEPPFSDAPELCGLVLRSHLLVILKHKAFATKQRGMSLIMNKLSAHDFGKPGSGKGIRLDDLEISEEEMEMYVDLHPITNRSPYTVVETMSLAKAAVLFRELGLRHLLVVPKTPERPPIVGILTRHDFMPEHILGLYPHCNPTSK* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5631 774 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 26 771 - -
Mal5g5631 774 PRINTS Plant CLC chloride channel signature 290 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal5g5631 774 PRINTS Plant CLC chloride channel signature 308 315 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal5g5631 774 PRINTS Plant CLC chloride channel signature 432 448 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal5g5631 774 PRINTS Plant CLC chloride channel signature 276 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal5g5631 774 PRINTS Plant CLC chloride channel signature 65 73 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal5g5631 774 SMART cbs_1 601 654 IPR000644 -
Mal5g5631 774 SMART cbs_1 711 762 IPR000644 -
Mal5g5631 774 ProSiteProfiles CBS domain profile. 708 772 IPR000644 -
Mal5g5631 774 Pfam CBS domain 709 757 IPR000644 -
Mal5g5631 774 SUPERFAMILY CBS-domain pair 585 758 IPR046342 -
Mal5g5631 774 SUPERFAMILY Clc chloride channel 69 584 IPR014743 -
Mal5g5631 774 CDD CBS_pair_voltage-gated_CLC_euk_bac 594 760 - -
Mal5g5631 774 Pfam Voltage gated chloride channel 148 562 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal5g5631 774 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 26 771 - -
Mal5g5631 774 PRINTS Chloride channel signature 480 500 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal5g5631 774 PRINTS Chloride channel signature 160 177 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal5g5631 774 PRINTS Chloride channel signature 191 210 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal5g5631 774 PRINTS Chloride channel signature 568 582 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal5g5631 774 PRINTS Chloride channel signature 530 549 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal5g5631 774 PRINTS Chloride channel signature 255 274 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal5g5631 774 PRINTS Chloride channel signature 512 528 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal5g5631 774 CDD ClC_6_like 60 581 - -
Mal5g5631 774 Gene3D Clc chloride channel 83 581 - -
Mal5g5631 774 Gene3D - 582 759 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5631 Mal-Chr5 131072249 131075988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5631 25 771 Ion Channels AT5G49890 76.000 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5631 K05016 - jre:108988922 1169.84