LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g5607	ATGGCAAGCGCAAGTGTTGTAGGCGTTGATGAAGAACAACATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAGCTGATTCTGTATTCATATTGGAAGAGTTCATGTGCCCACCGTGTCCGAATTGCTCTCAACCTCAAAGGTCTAAAATATGAGTACAAAGCAGTTGATCTGTTGAAGGGAGAACAATATCATCCTGATTTTCTCCAGCTCAACCCTGTTGGTTTTGTTCCTGTTCTTGTCGATGGCTCTGCTGTCATTTTTGACTCTTTTGCCATTATTATGTATTTGGAGGATAAGTACCCTCAACATCCTTTGCTCCCTACTCATGATATTCACAAAAGAGCTATCAATTTCCAGGCTGTCAGTATTGTTTCCTCATCAATACAACCTCTTCAAAACCTTAATACCCTGAAGTACATTGAGGAAAAAATTAGCCCTGATGTAAAACTTCCATGGGTCCAGAGTGTAATTAGAAAAGGATTCACAGCACTTGAAAAGCTATTGAAAGAACACGCTGGGAGGTATGCTACTGGAGATGAAGTTTTCATGGCGGATATATTTTTAGCACCACAGCTACACGCTGCTTCTAAGAGATTCAACATTGACATGAATGATTTTCCTATTCTATCAAGATTATACGAGACATATTATGAGATCCCAGCATTCCGGGAGACGTTGCCAGAGAATCAGCCAGATGCAGCAGGCTAG	732	0.3798	MASASVVGVDEEQHNNNNNNNNNNNNNNNNNKLILYSYWKSSCAHRVRIALNLKGLKYEYKAVDLLKGEQYHPDFLQLNPVGFVPVLVDGSAVIFDSFAIIMYLEDKYPQHPLLPTHDIHKRAINFQAVSIVSSSIQPLQNLNTLKYIEEKISPDVKLPWVQSVIRKGFTALEKLLKEHAGRYATGDEVFMADIFLAPQLHAASKRFNIDMNDFPILSRLYETYYEIPAFRETLPENQPDAAG*	244

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g5607	243	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	31	112	IPR004045	-
	Mal5g5607	243	MobiDBLite	consensus disorder prediction	9	28	-	-
	Mal5g5607	243	SFLD	Main (cytGST)	34	223	-	-
	Mal5g5607	243	CDD	GST_N_Zeta	33	105	IPR034333	-
	Mal5g5607	243	PANTHER	MALEYLACETOACETATE ISOMERASE	23	242	-	-
	Mal5g5607	243	MobiDBLite	consensus disorder prediction	1	28	-	-
	Mal5g5607	243	Pfam	Glutathione S-transferase, C-terminal domain	158	230	IPR004046	-
	Mal5g5607	243	Gene3D	Glutaredoxin	11	118	-	-
	Mal5g5607	243	TIGRFAM	maiA: maleylacetoacetate isomerase	34	241	IPR005955	GO:0003824\|GO:0005737\|GO:0009072
	Mal5g5607	243	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	118	243	IPR010987	-
	Mal5g5607	243	SUPERFAMILY	Thioredoxin-like	27	115	IPR036249	-
	Mal5g5607	243	Gene3D	-	119	243	-	-
	Mal5g5607	243	Pfam	Glutathione S-transferase, N-terminal domain	32	105	IPR004045	-
	Mal5g5607	243	SFLD	Glutathione Transferase (cytosolic)	34	223	IPR040079	-
	Mal5g5607	243	PANTHER	GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1	23	242	-	-
	Mal5g5607	243	CDD	GST_C_Zeta	120	238	IPR034330	-
	Mal5g5607	243	SUPERFAMILY	GST C-terminal domain-like	112	240	IPR036282	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g5607	Mal-Chr5	130734800	130738912	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g5607	32	241	Glutathione S-transferase Gene Family	AT2G02380	63.810	6.71e-97	281

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g5607	K01800		-	gmx:547590	339.732