Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5595 ATGAGATTGGATACCGGTAACTTCTCATGGGGAAGTGAAGCCGTCACTCGCAAGACTCGTTTGCTCGATGTGGTTTACAATGCTTCCAACAATGAGTTGCTCAGAACTCAGACCCTTGTGAAGAGTGTTATTGTGCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAACACTATGGTGTTGAAATCGGCAGGAAAAAGAAAATTGAGATTGCTATAAAATGGGGCAAGGGCTTGGCTCAAAAGTTGGAAACTGAGGCTAAGCTGAAGGAACTAGAAGTTGAGAAGGAAAAGCCTTTTAAAAATCAAAAAAAAAAAAAAAATTGA 330 0.4121 MRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELLRTQTLVKSVIVQVDAAPFKQWYLQHYGVEIGRKKKIEIAIKWGKGLAQKLETEAKLKELEVEKEKPFKNQKKKKN* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5595 109 Pfam Ribosomal protein S8e 1 53 IPR022309 -
Mal5g5595 109 Gene3D - 1 108 - -
Mal5g5595 109 PANTHER CMV 1A INTERACTING PROTEIN 1 1 87 - -
Mal5g5595 109 PANTHER 40S RIBOSOMAL PROTEIN S8 1 87 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5595 Mal-Chr5 130618513 130621125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5595 1 105 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 64.220 4.40e-43 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5595 K02995 - han:110929725 138.658