Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5593 ATGAAACGTCCCGCCGACGAATTGGCCCCCGTCCCCGCCACCGCCATCCCCAAACCAGTTTTCCTCACCAAAGCCCAACGTGAACAACAAGCACTTGAACGCCGCCACAATCAAATCGCCGGTCACAAACGCAACCAAGAAGAACTTCTCCTTTCCCGCCCCTCCGATCCTAAACCCTCCGACTCCGATCGCCGCGACCGTGATCGCGACCGAGACAGAGATTCTTACAGAGAAAGAGAAAGGGATAGAGACAGAGAGCGTGATAGGGAAAGGGAAAGAGACAGAGATAACAGAGATAGGGAACGAAGAAATCGCGATAGGGAACGCGAAGAAGAGAATAAAGCTCGTGAGCGTGCTCGATTGGAGAAGCTAGCGGAACGGGAACGTGAAAAGGAGCTTGAATCGATCAAGGAACAATACCTAGGTTCAAAAAAACCTAAAAAAAGGGTTATTAAACCCAGCGAGAAATTTCGATTTTCGTTCGATTGGGAAAACACTGAAGATACTTCGCGTGATATGAATGCTCTTTACCAAAACCCTCACGAGGCTCAGCTTCTTTTTGGGCGAGGGTTTAGGGCTGGGATGGATCGGCGTGAGCAGAAGAAGCTTGCGGCGAAGCAAGAGAAAGATATGAGGGATCAGATTAGGAAGAAGGATGGTGTTGAGGAGAAGCCTGAGGAGGCTGATGCTCAGCGGCGTAAGGAGGAGGCTGCTGATGCGTATGATGCCTTTGATATGAGGGTTGATCGCCATTGGAGTGATAAGAAGCTTGAGGAAATGACAGAGAGGGATTGGCGTATATTTAGGGAGGATTATAACATTTCTTACAAGGGTTCTAAGATTCCGAGGCCTATGAGGAGTTGGGTTGAGAGCAAGTTGAGTCAAGAGCTTTTGAAGGCTGTGGAGAAGGCTGGTTATAAAACCCCTTCTCCGATTCAGATGGCTGCTATTCCGCTTGGTTTGCAGCAGCGTGATGTTATCGGTGTTGCTGAGACGGGTTCAGGGAAGACTGCTGCATTTGTTCTTCCTATGTTGAGTTATATTACTAGGCTTCCTCCTATTAGTGAGGAGAATGAGGCTGAGGGTCCTTATGCTGTTGTTATGGCGCCGACTCGTGAGCTTGCTCAGCAGATTGAGGATGAGACTGTTAAATTTGCTCAGTATATGGGGATTAAAGTTGTTTCGATTGTTGGTGGTCAGTCTATTGAGGAGCAAGGGTTTAAGATAAGGCAAGGTTGTGAAATTGTGATTGCTACTCCTGGTCGTTTGATTGATTGCTTGGAGCGTCGCTATGCGGTTCTTAACCAGTGTAATTATGTTGTTCTTGATGAGGCTGATCGTATGATTGATATGGGGTTTGAGCCGCAGGTCATGGGTGTGCTGGATGCTATGCCTTCGAGTAATCTGAAACCGGAGAATGAAGATGAGGAGCTCGATGAGAAGAGGATTTATAGGACTACTTATATGTTCAGTGCCACCATGCCTCCTGCTGTGGAGAGGCTTGCTAGGAAGTATTTGAGGAACCCTGTTGTGGTGACTATAGGGACTGCTGGAAAGGCAACTGACTTGATCAGCCAGCATGTAATCATGATGAAGGAATCTGAGAAAACTTATAAGCTTCAGAGATTGTTGGATGAGCTTAATGACAAGACTGCAATTGTGTTTGTCAACACCAAGAAGAATGCTGATTTTCTTGCTAAGAATTTGGATAAGGAAGGCTATCGCGTGACTACTTTGCATGGAGGGAAATCGCAGGATCAGAGGGAGATTAGTCTTGAAGGATTTAGGACCAAGAGATATAATGTGCTTGTTGCAACCGATGTTGCTGGACGTGGTATTGACATTCCTGATGTGGCTCATGTTATCAACTATGATATGCCTGGGAATATTGAAATGTACACCCATCGTATTGGGCGTACTGGACGTGCAGGAAAGACGGGTGTGGCTACAACATTCCTGACTCTTCAGGACACTGATGTCTTTTATGAACTTAAGCAGATGCTCATTCAGAGTAACAGTCCTGTTCCACCTGAATTGGCAAGGCATGAAGCTTCCAAATTCAAGCCAGGATCTATTCCCGACAGACCACCTAGGCGAAACGACACTGTTTTTGCCCATTAG 2121 0.4677 MKRPADELAPVPATAIPKPVFLTKAQREQQALERRHNQIAGHKRNQEELLLSRPSDPKPSDSDRRDRDRDRDRDSYRERERDRDRERDRERERDRDNRDRERRNRDREREEENKARERARLEKLAEREREKELESIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKQEKDMRDQIRKKDGVEEKPEEADAQRRKEEAADAYDAFDMRVDRHWSDKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWVESKLSQELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKESEKTYKLQRLLDELNDKTAIVFVNTKKNADFLAKNLDKEGYRVTTLHGGKSQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVFYELKQMLIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAH* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5593 706 MobiDBLite consensus disorder prediction 57 145 - -
Mal5g5593 706 Pfam DEAD/DEAH box helicase 311 501 IPR011545 GO:0003676|GO:0005524
Mal5g5593 706 Gene3D - 247 516 IPR027417 -
Mal5g5593 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 665 IPR027417 -
Mal5g5593 706 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 94 699 - -
Mal5g5593 706 PANTHER - 94 699 - -
Mal5g5593 706 CDD SF2_C_DEAD 524 653 - -
Mal5g5593 706 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 539 683 IPR001650 -
Mal5g5593 706 SMART ultradead3 305 527 IPR014001 -
Mal5g5593 706 Gene3D - 517 704 IPR027417 -
Mal5g5593 706 SMART helicmild6 563 644 IPR001650 -
Mal5g5593 706 Coils Coil 204 224 - -
Mal5g5593 706 CDD DEADc_DDX23 297 513 - -
Mal5g5593 706 Pfam Helicase conserved C-terminal domain 539 644 IPR001650 -
Mal5g5593 706 MobiDBLite consensus disorder prediction 673 706 - -
Mal5g5593 706 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 441 449 IPR000629 -
Mal5g5593 706 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 286 314 IPR014014 GO:0003724
Mal5g5593 706 MobiDBLite consensus disorder prediction 1 149 - -
Mal5g5593 706 MobiDBLite consensus disorder prediction 197 236 - -
Mal5g5593 706 MobiDBLite consensus disorder prediction 28 51 - -
Mal5g5593 706 MobiDBLite consensus disorder prediction 681 706 - -
Mal5g5593 706 Coils Coil 91 134 - -
Mal5g5593 706 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 317 512 IPR014001 -
Mal5g5593 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 465 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5593 Mal-Chr5 130600551 130602671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5593 293 693 Eukaryotic Initiation Factors Gene Family AT3G13920 33.333 2.95e-61 209