Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5592 ATGAACAAAACAACTAAGCATGATATTAAAGATGTTGAGTGCTTGCACTACTACGATGATGAAATCTCCAGTTGTGGTTGCGGTTTTATTGGGTTCAAGAAAAACCAAGTGTTTGATTACAATTTCGGCAGCGAGATAGGAGACGACGACGATGATGGTGATGATTCAGAAGAGCTGTTTGAGATAAATTTGAAGAAGGAACGATTGGATTCAATAAGAGAAGAAGAGTGGTGTGAGAGCAGCACTGTGTTCTCTCTTGATATACACAATCATGATGATGTTGTCTATGTGGCAGTGGGAAAAAATATTAGAGGTTCAAGCATGGAAGCACTTTCATGGGCCTTGAAACATGCCGTGACACCTTCAACAACTACTGTTTCTCTCCTACACGTTTTCCCTCAAGTCAAGCTCATTCCAACTCCATTGGGAAAGATTCCAAGGAGTCGTGTAAATCTAGAGCATGTTAACATCTACTTGACCCAAGTGAAAAGCAAGAGGAAATTGCTCCTTCAGAAGTTCATGAAGCTATGTATTGAATCAAAGGTTAAGGTAGAAATGACGCTTATTGAGGGTGACAATGTTGCTGAAGCCATTGTGGGCCATGTAGGGAATCTAAATATAAGGAAATTGGTGATCGGAACTACCCAATCTAATTTAAGCAAAAATGGGTCAGGAAGGCAAAATTCCATTGCGGACATGGTGTTAAAAACCGTACAAGAAAGTTGTGATGTTAAAATCATATGTGAAGGAAAAGAAGTAATCGATCAGATGATTAATGGGTCCACTTCAAAACACACCAGAAATTCTCATGAAGTAGAGGAATCCCATGGTTTTGTCCCACTCAAGTTTTTGATGCCCAATCTATCATGGTTATTTAGGTCCAGATTTTTATCACCAAGATGA 903 0.3931 MNKTTKHDIKDVECLHYYDDEISSCGCGFIGFKKNQVFDYNFGSEIGDDDDDGDDSEELFEINLKKERLDSIREEEWCESSTVFSLDIHNHDDVVYVAVGKNIRGSSMEALSWALKHAVTPSTTTVSLLHVFPQVKLIPTPLGKIPRSRVNLEHVNIYLTQVKSKRKLLLQKFMKLCIESKVKVEMTLIEGDNVAEAIVGHVGNLNIRKLVIGTTQSNLSKNGSGRQNSIADMVLKTVQESCDVKIICEGKEVIDQMINGSTSKHTRNSHEVEESHGFVPLKFLMPNLSWLFRSRFLSPR* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5592 300 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 16 293 - -
Mal5g5592 300 Gene3D HUPs 88 263 IPR014729 -
Mal5g5592 300 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 16 293 - -
Mal5g5592 300 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 99 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5592 Mal-Chr5 130584063 130588035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5592 111 251 U-box Gene Family AT4G25160 30.986 1.70e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5592 - - gmx:100799795 324.709