Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5579 ATGGGGAACGTGAATGCGAATGGAAATTCTTCCCAAGTAGTACAAGAAGAAGAAGCTTTCGCCGCCACTGTTCCGCTTTCAAATGGTGATGGAATCGATAACTCGATGATGATGATGACGAGTCACTCTCCCCCCATCTTCACTTCTCAAGTTCCTGCTGTTCCTTTGCAAAGACCTGATGAGATGCATGCTGTTGCTGCGTCCACGCATTCACGGACACAAACTACTTCTGGCTATCCAGATATATACAATGATCACAAAATTCCAACTATGATTACTTGGAATTATGGTGGTGAACAAATTTCTGTTCAGGGATCCTGGGATAATTGGAATTCAAGAACTGCCTTGCAGAAATCAGGGAAAGATTTCGCGATATTGAAGGTACTGGCCTCTGGTGTTTACCACTATAGGTTTATTGTTGATGGAATATGCTGTTACGACCCGGAGTTGCCTTGGTCGAAAGATGAAGCTGGGAATGCTTGCAACATCTTGGATTTACTGGATTATGTTCCTGAAGACATTGGAAGCATTTCTGATTTTGAACCTCCTCAATCACCAACATCAAGTTATGACAATTTACCATTTAGTTCTGAAGATTGTGCAAAGGAGCCGCCATTAGTTCCTCCACACTTAGCAACAACGCCACTAAATGTACGCACAACAAATATAGAAATCCAACCTCCTAAGCCAAGACCTCAACATGCAGTGCTCAATCATTTTTACATCCCGAGAGGAGAAAGCAGTCCTTCAGTGGTTGCCCTTGGTACAACTAATCGGTATCTGTCCAAATATGTTACTGTGGTGCTTTACAAGTCTTTGCAGAGGTAA 828 0.4275 MGNVNANGNSSQVVQEEEAFAATVPLSNGDGIDNSMMMMTSHSPPIFTSQVPAVPLQRPDEMHAVAASTHSRTQTTSGYPDIYNDHKIPTMITWNYGGEQISVQGSWDNWNSRTALQKSGKDFAILKVLASGVYHYRFIVDGICCYDPELPWSKDEAGNACNILDLLDYVPEDIGSISDFEPPQSPTSSYDNLPFSSEDCAKEPPLVPPHLATTPLNVRTTNIEIQPPKPRPQHAVLNHFYIPRGESSPSVVALGTTNRYLSKYVTVVLYKSLQR* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5579 275 CDD E_set_AMPKbeta_like_N 89 165 - -
Mal5g5579 275 Gene3D - 177 273 - -
Mal5g5579 275 Pfam Glycogen recognition site of AMP-activated protein kinase 88 166 IPR032640 -
Mal5g5579 275 Gene3D Immunoglobulins 82 168 IPR013783 -
Mal5g5579 275 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 275 - -
Mal5g5579 275 SMART AMPKBI_2 183 273 IPR006828 GO:0005515
Mal5g5579 275 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 201 271 IPR006828 GO:0005515
Mal5g5579 275 SUPERFAMILY E set domains 87 173 IPR014756 -
Mal5g5579 275 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 275 IPR043554 -
Mal5g5579 275 SUPERFAMILY AMPKBI-like 170 272 IPR037256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5579 Mal-Chr5 130472626 130476267 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5579 K07199 - gmx:100777497 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5579 5 130472626 130476267 Mal4g3092 4 91979122 91982434 PCT