Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5577 ATGATTTTAGTTATTGGATGTGTAGAGGATGAAAGGAAGAAATTAGAATGTTCAGAGGGAAAGGTGAAGATTGTGACAAGTCGTCAAAGCAGTACGATGGCAGCTAGTTTTAGTTTTGAAGAGCTTTCAATGGCAACAGAAAATTTTAAGGAATTGATAGGGGAAGGTGGTTTTGGAAGAGTTTATAAGGGTTGCCTCCCAACCGGCGAGCATGTTGCTGTAAAACAATTAAATCCTGATGGTTGTCAAGGTTGTCAAGAATTTCTGACAGAAGTTTTTATGCTAAGCGTGCTGCGTCATTCTAACCTTGTTAAGTTAATTGGCTATTGCAACAATAGAGATCAAAAGCTTTTGGTTTATGAATACATGCCTAAGGGATGTCTTCAAGATCATCTTTTTGATGTTACCCGAGACAGAGAACCTCTAAGTTGGAGTTCTCGAATGAAGATTGCTGTTGGAGCAGCTCGAGGTCTTAAGTATCTCCATTGTACAGCAGATCCGCCCGTTATCTACCGAGACATGAAACCTGCCAACATTTTATTGGAAAATGATTTCAGCGCAAAACTGTCGGACTTTGGGATTGCTAAACTAGGACCTGTTGGAGACAAAACTCATGTTTCAACCAGAGTGATGGGTACAGAAGGTTACTGCGCACCAGAATATTTCTTGAGTGGCAAGTTAACTAAACAATCTGATATCTACAGTTTTGGTGTGGTTTTGCTGGAGTTGGTCACCGGACGCAGAGCACTAGATCATAGTAAAAATGCAGGAGAGCTCGACTTAATTTCATGGTCTCGCCCATATTTTAATGACCCGAGAAAGTTTATGCAAATGGCTGACCCTCTTTTGCAAGGACAATTCCCCAAACGCGGTTTGCATCAGCTGATTTCTATGACTGCTATGTGTCTCCGGGAGGATCCAATAGACCGTCCAACCATTGGTCATATTGTTGATGCACTAGAATACCTAGCTTCTCAGAGTCCGTAA 987 0.4154 MILVIGCVEDERKKLECSEGKVKIVTSRQSSTMAASFSFEELSMATENFKELIGEGGFGRVYKGCLPTGEHVAVKQLNPDGCQGCQEFLTEVFMLSVLRHSNLVKLIGYCNNRDQKLLVYEYMPKGCLQDHLFDVTRDREPLSWSSRMKIAVGAARGLKYLHCTADPPVIYRDMKPANILLENDFSAKLSDFGIAKLGPVGDKTHVSTRVMGTEGYCAPEYFLSGKLTKQSDIYSFGVVLLELVTGRRALDHSKNAGELDLISWSRPYFNDPRKFMQMADPLLQGQFPKRGLHQLISMTAMCLREDPIDRPTIGHIVDALEYLASQSP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5577 328 SUPERFAMILY Protein kinase-like (PK-like) 24 321 IPR011009 -
Mal5g5577 328 ProSiteProfiles Protein kinase domain profile. 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5577 328 PIRSF ILK 18 327 - -
Mal5g5577 328 PANTHER OS07G0668900 PROTEIN 26 326 - -
Mal5g5577 328 CDD STKc_IRAK 53 321 - -
Mal5g5577 328 SMART serkin_6 47 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5577 328 Gene3D Phosphorylase Kinase; domain 1 9 122 - -
Mal5g5577 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Mal5g5577 328 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Mal5g5577 328 PANTHER OS07G0668900 PROTEIN 26 326 - -
Mal5g5577 328 Gene3D Transferase(Phosphotransferase) domain 1 123 327 - -
Mal5g5577 328 Pfam Protein kinase domain 50 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5577 Mal-Chr5 130438926 130440392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5577 30 325 Glycoside Hydrolase AT3G07070 58.528 1.20e-128 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mal5g5577 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5577 - - gmx:100796595 431.409