Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5574 ATGTTACATAATTTGGTCAAGTTATTTCTGCGTGCAAACGACTCTTCACTTCTTCATTCACAAACTCACAGGCCGAGTTCAACAAGCGGCAAGCAAATAAACCATAATCAGTCATCATCTTCAATTGTTGAAGGTGTAGAGAAATGGGTCAACTCTATTCATGAAAGTATTTTGCCAAATAGTCAAGAGAGTTTTGTTGATTTTACACCACACTTGGAAATGCAGTTTGAATCTGAGGCAGCAGCCTATGAATTTTATAATGAATATAGTAGGAGAATTGGATTTGGTATTCGTCGAGAATACGGCAATAAAAGCAAAATAGATGGAATTCTGACTTCAAGAAGATTCTCATGCTTCAAAGAGGGAAAACGAGGTGATGACAAACGAGACCACTTGACAAAAGAGTCTAGAGCAGAAACTAGAACTGAGTGTAAAGCACGTATGGTTATTTCACTTGATCGAAAAATTGGAAAATACAAGGTTCTCGATTTTGTAGCTGAACATAATCACCTTCTTCAACCACCAGGGAAAAATCTGCAGCAACAAATGATGGTACACATCCCCTTCATTCAAGTCCTACTTTTACTCAATTGTTGA 597 0.3735 MLHNLVKLFLRANDSSLLHSQTHRPSSTSGKQINHNQSSSSIVEGVEKWVNSIHESILPNSQESFVDFTPHLEMQFESEAAAYEFYNEYSRRIGFGIRREYGNKSKIDGILTSRRFSCFKEGKRGDDKRDHLTKESRAETRTECKARMVISLDRKIGKYKVLDFVAEHNHLLQPPGKNLQQQMMVHIPFIQVLLLLNC* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5574 198 Pfam FAR1 DNA-binding domain 84 173 IPR004330 -
Mal5g5574 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 38 173 - -
Mal5g5574 198 MobiDBLite consensus disorder prediction 19 38 - -
Mal5g5574 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 38 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5574 Mal-Chr5 130395609 130399178 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g5574 FAR1 6.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5574 - - cam:101493633 207.608