Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5535 ATGAAACTCGACAACTCCAACTCCAACTCCAATTCCAACGGCCAGATGTCCTTCACCGCCGCCGCCGACGTTACTCCGCCGCATAACCCCGACGACGCCGAAGAAGCATTTGTGCCGCCGCTGAACTTCGCTATGGTCGATAACGGTATTTTCAGGTCCGGTTTTCCCGATTCTGCCAACTTCGGATTCATGAAATCGCTTCGTCTTCGTTCCGTAATATGTTTGTGCCCTGAACCCTATCCTGAAGCCACTGCGGAGTTTTTGAATGCCAATGGAATTAAGCTTTATCAATTCGGTATCGATGGCTGCAAGGAACCCTTTGTCAACATCCCAAATGATAAGATTCGCGAAGCTTTGAAAGTAGTGCTCGATGTTAGGAACCACCCTGTGCTGATTCATTGTAAACGAGGAAAGCACCGCACTGGTTGTCTTGTGGGATGCATAAGAAGATTGCAGAGGTGGTGTCTATCATCTATTTTTGATGAGTACCAAAGGTTTGCAGGTGCTAAAGCCAGAGTGTCGGACCAGAGGTTCATCGAATTGTTTGATATTTCCAGTTTGAAGCACAACCCACTGACATTTTCATGCTCAAAGAAATAG 600 0.47 MKLDNSNSNSNSNGQMSFTAAADVTPPHNPDDAEEAFVPPLNFAMVDNGIFRSGFPDSANFGFMKSLRLRSVICLCPEPYPEATAEFLNANGIKLYQFGIDGCKEPFVNIPNDKIREALKVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAGAKARVSDQRFIELFDISSLKHNPLTFSCSKK* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5535 199 ProSitePatterns Tyrosine specific protein phosphatases active site. 132 142 IPR016130 GO:0016311|GO:0016791
Mal5g5535 199 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 37 184 IPR029021 -
Mal5g5535 199 CDD PFA-DSP_Siw14 37 183 - -
Mal5g5535 199 MobiDBLite consensus disorder prediction 1 22 - -
Mal5g5535 199 Gene3D Protein tyrosine phosphatase superfamily 36 186 IPR029021 -
Mal5g5535 199 MobiDBLite consensus disorder prediction 1 33 - -
Mal5g5535 199 ProSiteProfiles Dual specificity protein phosphatase domain profile. 42 196 IPR020422 GO:0006470|GO:0008138
Mal5g5535 199 PANTHER TYROSINE-PROTEIN PHOSPHATASE 26 197 - -
Mal5g5535 199 PRINTS Plant and fungal dual specificity phosphatase signature 74 87 IPR020428 GO:0016791
Mal5g5535 199 PRINTS Plant and fungal dual specificity phosphatase signature 93 107 IPR020428 GO:0016791
Mal5g5535 199 PRINTS Plant and fungal dual specificity phosphatase signature 110 124 IPR020428 GO:0016791
Mal5g5535 199 PRINTS Plant and fungal dual specificity phosphatase signature 37 54 IPR020428 GO:0016791
Mal5g5535 199 Pfam Tyrosine phosphatase family 38 191 IPR004861 -
Mal5g5535 199 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 26 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5535 Mal-Chr5 129994863 129996649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5535 19 199 Protein tyrosine phosphatase (PTP) family AT4G03960 69.519 1.01e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5535 K18045 - gmx:100785520 339.347