Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5521 ATGGAAGTAGTAGTTTGTAGACAAGAACAGTCAAATCAACATGCTGAGGATATGTTGAAGTTCTCGGGATGCTCAAAAGCTTTTGGAAATTCTAAGAGAAAGGCTGAAGAAATTCACGGTTGTGGTGGTAATGAGAAACCAGAAGCAGGTGGGAAAGAAAATACCGTGGGATGTTTGAAGGAGGCTACGGCTTCACAAGAAGAGCAGTCAAACCAGCATACTGACATTAAGCCGGATAAAATTCCAAGATGCTCAGAAGATTTTGGAATTTCATATAAGAGAGGATTTGAAGAATGTCATAGACATCATACCAATACAAATTCAGAAGGGGGGGAAGATGTTCTGGAATGTTTAAAGGAGACACCCAATCTAGCATCTAAGAAAGTAGCTGAACCAAAGAAGCATGCTGCCTCAAAGAAGAATTGGGAACTTGAAGATGATCTCTTGCTAGACGAACTTGAACAAGATGAAGAAATGCTTTTTCTTCTCAAGACAAAAAACAGGAGCAGAGCTGGTAGAATCGATAACATTATGGGTGTTCAACAAAATACCCGGAAATGTCATCAGTGCAGGAAAAAAGAAAGAACATCTTTTGTGCCTTGTACTAAGTGTTCAAAAATGTACTGTATGCGATGCATCAATCAATGGTACCCTGATATGTCTATTGAAGAATTTGCTGAAAGTTGCCCATTTTGCATTAAAAACTGCAATTGCAATGTTTGCCTGCGTTTGAAAGGAACAATTAAGACATCTAACATGGACATCACCAATTACGAAAAAGCTCAGTATCTGCATTACATGATTAACTTACTCTTTCCATATCTGAAACAAATTTGTCATGAACAAAGTCAAGAGGAAGATATAGAAGCCAAAATACAAGGAAAACCTTTTTCTGAGATTGAGATACCACAAAGTCTTTGTGGTGACAAGGAACGCGTCTATTGTGATTATTGTGCTACTTCAATTACTGACCTTCATCGAAGCTGCCCAAATTGTTCCTATGAGCTTTGTCTTAAATGTTGCCAAGAAATACGCGATGGAAGCATTACTCCCCGGGCTGAGATGAAGTTCCAATATGTGAATAGGGGCTATGATTATATGCATGGTGGTGACCCTCTACCAGTGTCTTGTGATTTAGAGACTTCAGATGGTCATCTTGAGATATCTACCAAGTGTAATGCCAATAGTGATGGAAGTGTTAGTTGTGTCCCAAAGGAAATGGGAGGTTGTGGTAGTTCTGTGTTGGAGCTGAGGCGCATCCTCCCACTTGGGTGGATGTCTGACTTGGAAGACAAAGCTCACGATATGCTGAAATTTTGGGAAATTGAACAAACAACTCTTCAGAAGGAAGAAGCTGTATCAAGCTACAACTCTATGAGAAATAAATCCTTTACAGAAGGCACAAATGATAATAACATATATGGTTCAGAGTCAAAAGGCATTTTAAAAGAAGGGATGCAGCTATTCCGAAAACATTGGACAAATGGTGAACCGATTATCGTCCGTGATGTTCTAAAACACGGGACTGGTCTGAGCTGGGAGCCGATGGTCATGTGGCGAGCATTGTGTGATAATGTGGCTTCAGATATCAGTTCAAAAATGTCAGAAGTGAAGGCCATCGATTGCATGGCTAATTGTGAGGTTGCAATTAATACTCGTCTGTTCTTTAAAGGTTATATAGAGGGAAGAACATATAGAAATCTCTGGCCAGAGATGCTGAAGCTAAAAGACTGGCCCCCTTCTGATAAATTTGAAGATCTTTTGCCCCGTCATTGTGATGAATTTATTCGTTTCTTGCCATTTCAACAGTATACTGATCCTCGTGCTGGAACTCTCAATCTGGCTGTAAAGTTGCCAGCCCATGTTCTAAAACCTGATATGGGTCCAAAAACATATATTGCTTATGGGATTAGAGAAGAACTTGGAAGGGGAGACTCTGTAACTAAGCTTCACTGTGATATGTCAGATGCGGTGAATATTTTGACCCATACAGCGGAGATATTATTAACTGATAGGCAGAACTCTACTATTTCCAATTTGAAAGAAGCACACAAAGCACAAGATGAGAGAGAACACCGTGCTCCAGAGAGGGCTGCTGTATGCCTAAATGGTCAACCTTGCGACAACAGAGAACATATAGAAAATAATGAAGTATTAGAATGCAACGATATGGATAACCGTCCTATTGAAATCAGTGGAGATATCTTTCACAATGTGTCTAAGGGGGACATTTCTACAGAAAATGAAACAATGGTAACAGGTAGTGCCCTGTGGGATATATTTCGGAGAGAGGACACTGAAAAGTTAGGAGCATATCTTAGAAAACACTCGAAAGAATTCAGGCATACTTATTGTTCACCAGTTGAGCAGGTTGTACATCCAATTCATGACCAATGTTTTTATTTGACTTTGGAGCACAAGAAGAGGTTGAAGGAGGAGTTTGGTGTAGAACCGTGGACTTTTGAGCAAAAACTTGGAGAGGCAGTATTTATTCCTGCTGGATGCCCACATCAAGTCAGGAATCTTAAGTCATGCACAAAAGTTGCTGTAGACTTCGTGTCCCCAGAAAATGTACACGAGTGTCTTCGTTTAACTGAAGAATTCCGTCAGCTTCCCAAGAACCACAAAGCTAGAGAAGATAAACTTGAGATAAAGAAAATGATAGTTTATGCCATGGATCAAGCTGTCAAAGACCTAAAAGCTTTACTCAATTGTTCTTGA 2721 0.3991 MEVVVCRQEQSNQHAEDMLKFSGCSKAFGNSKRKAEEIHGCGGNEKPEAGGKENTVGCLKEATASQEEQSNQHTDIKPDKIPRCSEDFGISYKRGFEECHRHHTNTNSEGGEDVLECLKETPNLASKKVAEPKKHAASKKNWELEDDLLLDELEQDEEMLFLLKTKNRSRAGRIDNIMGVQQNTRKCHQCRKKERTSFVPCTKCSKMYCMRCINQWYPDMSIEEFAESCPFCIKNCNCNVCLRLKGTIKTSNMDITNYEKAQYLHYMINLLFPYLKQICHEQSQEEDIEAKIQGKPFSEIEIPQSLCGDKERVYCDYCATSITDLHRSCPNCSYELCLKCCQEIRDGSITPRAEMKFQYVNRGYDYMHGGDPLPVSCDLETSDGHLEISTKCNANSDGSVSCVPKEMGGCGSSVLELRRILPLGWMSDLEDKAHDMLKFWEIEQTTLQKEEAVSSYNSMRNKSFTEGTNDNNIYGSESKGILKEGMQLFRKHWTNGEPIIVRDVLKHGTGLSWEPMVMWRALCDNVASDISSKMSEVKAIDCMANCEVAINTRLFFKGYIEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRFLPFQQYTDPRAGTLNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEILLTDRQNSTISNLKEAHKAQDEREHRAPERAAVCLNGQPCDNREHIENNEVLECNDMDNRPIEISGDIFHNVSKGDISTENETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPVEQVVHPIHDQCFYLTLEHKKRLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAMDQAVKDLKALLNCS* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5521 906 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 66 905 - -
Mal5g5521 906 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 66 905 IPR045109 GO:0032454|GO:0033169
Mal5g5521 906 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 182 253 IPR018866 -
Mal5g5521 906 CDD cupin_RmlC-like 793 853 - -
Mal5g5521 906 ProSiteProfiles Zinc finger RING-type profile. 187 232 IPR001841 -
Mal5g5521 906 SMART cupin_9 588 869 IPR003347 -
Mal5g5521 906 SUPERFAMILY Clavaminate synthase-like 487 902 - -
Mal5g5521 906 Gene3D Cupin 478 878 - -
Mal5g5521 906 ProSiteProfiles JmjC domain profile. 607 869 IPR003347 -
Mal5g5521 906 MobiDBLite consensus disorder prediction 60 80 - -
Mal5g5521 906 Pfam JmjC domain, hydroxylase 749 852 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5521 Mal-Chr5 129837416 129842049 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal5g5521 JmjC 1.2e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5521 K15601 K21989 gmx:100797860 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5521 5 129837416 129842049 Mal5g5521 5 129837416 129842049 ECH
Mal5g5521 5 129837416 129842049 Mal4g3200 4 93796501 93799731 PCT