Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5493 ATGGGTTGTCACGGTAGCAAGCACAAGAAACCTACGTCAGATGAGTTTACCCCCCGTCGTGGATCAGCCGCCGCCGCCACCACCACCGCCACCACAAGCAGCGCTGCTGCTTCCCGTTCCCGTCCCGCCGGTGTTGATAGTAATTATCGCTACATCGCTGTTCCACCATCTGCAACTCAGGTTCAGACTTCAACAGTCACACAACCACAACCAAATCCAAAACCCTCCTCTGCCACACCTCAGAAACCAGTGCAGAAGATTGACACAACCATATTAGGTAAACCCTATGAAGATATAAAGAAATTCTATACATTAGGTAAAGAATTAGGTCGAGGTCAATTTGGGATTACTTATTTTTGTACTGAGAATTCAACTGGTTTAAATTACGCTTGTAAATCTATCTTAAAGAGGAAGCTTGTTTCGAAAGCGGATAAAGAAGATATTAAAAGAGAGATTCAGATTCTGCAGCATATGTCTGGTCAACCCAACATTGTCGAGTTTAAAGGTGCTTTTGAGGATAGATTTTCTGTGCATCTTGTCATGGAACTTTGTGCTGGTGGAGAGTTGTTTGATAGGATTATTGCTCAAGGCCATTATTCCGAGAGAGCTGCTGCGTCTATTTGTAGGGATGTTGTTAAAGTTGTGCACATTTGTCATTTTATGGGTGTTTTGCATCGCGATTTGAAGCCCGAGAATTTTTTGCTTTCTAGTAAGGATGCTGGGGCAGCACTCAAGGCTACTGATTTTGGACTTTCTGTGTTTATTGAAGAAGGGAAAGTTTACCGTGATATGGTAGGCAGTGCTTACTATGTTGCTCCTGAGGTTCTGCGTCGTAATTATGGAAAGGAAATAGACATTTGGAGTGCTGGCATCATATTGTATATTCTCCTTAGTGGTGTTCCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAATGCCATATTGGAAGGCGAACTTGACTTTGTTAGTGAACCATGGCCATCAATATCTGACAGTGCTAAAGATCTAGTCAGGAAGATGCTGACACCGGATCCAAAGAAGAGAATTACTTCTACACAAGTCCTTGAACATCCGTGGATGAGAGAAGGTGGAGAGGCCTCTGATAAACCGATTGATAGTGCAGTTCTATCTAGAATGAAACAATTCAGGGCAATGAATAAGTTCAAGAAACTTGCATTGAAGGTTATGGCTGAGAATCTATCAGAAGAAGAGATTAAAGGTCTCAAGGCAATGTTTGCAAACATGGACACTGATAGTAGTGGCACGATCACCTATGAAGAACTGAAGACAGGCTTGGCTCGAATTGGATCAAGACTGTCTGAGGTTGAAGTGAAACAACTTATGGAAGCTGCTGATGTTGATGGAAATGGGTCGATTGACTATCTTGAATTCATATCGGCTACAATGCATAGGCACAGACTCGAGCGGGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGACAATAGTGGGCATATTACTAGAGAAGAATTGGAGACTGCCATGACAAAGCATGGAATGGGTGATGAAGCAACAATAAAGGAAATAATTTCTGAGGTGGATACAGATAATGATGGGCGAATAAACTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCCACACCAGGAACCACTATTTTAA 1656 0.4209 MGCHGSKHKKPTSDEFTPRRGSAAAATTTATTSSAAASRSRPAGVDSNYRYIAVPPSATQVQTSTVTQPQPNPKPSSATPQKPVQKIDTTILGKPYEDIKKFYTLGKELGRGQFGITYFCTENSTGLNYACKSILKRKLVSKADKEDIKREIQILQHMSGQPNIVEFKGAFEDRFSVHLVMELCAGGELFDRIIAQGHYSERAAASICRDVVKVVHICHFMGVLHRDLKPENFLLSSKDAGAALKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRNYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISDSAKDLVRKMLTPDPKKRITSTQVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKFKKLALKVMAENLSEEEIKGLKAMFANMDTDSSGTITYEELKTGLARIGSRLSEVEVKQLMEAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGHITREELETAMTKHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQEPLF* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5493 551 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 64 545 - -
Mal5g5493 551 SMART efh_1 480 508 IPR002048 GO:0005509
Mal5g5493 551 SMART efh_1 408 436 IPR002048 GO:0005509
Mal5g5493 551 SMART efh_1 444 472 IPR002048 GO:0005509
Mal5g5493 551 SMART efh_1 515 543 IPR002048 GO:0005509
Mal5g5493 551 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Mal5g5493 551 ProSitePatterns Protein kinases ATP-binding region signature. 109 136 IPR017441 GO:0005524
Mal5g5493 551 Gene3D Transferase(Phosphotransferase) domain 1 189 368 - -
Mal5g5493 551 CDD STKc_CAMK 102 360 - -
Mal5g5493 551 ProSiteProfiles EF-hand calcium-binding domain profile. 440 475 IPR002048 GO:0005509
Mal5g5493 551 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Mal5g5493 551 SUPERFAMILY EF-hand 400 540 IPR011992 -
Mal5g5493 551 CDD EFh 483 541 IPR002048 GO:0005509
Mal5g5493 551 Gene3D - 369 543 - -
Mal5g5493 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Mal5g5493 551 SMART serkin_6 103 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5493 551 MobiDBLite consensus disorder prediction 53 72 - -
Mal5g5493 551 ProSitePatterns EF-hand calcium-binding domain. 524 536 IPR018247 -
Mal5g5493 551 ProSiteProfiles EF-hand calcium-binding domain profile. 476 511 IPR002048 GO:0005509
Mal5g5493 551 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
Mal5g5493 551 Pfam Protein kinase domain 103 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5493 551 Gene3D Phosphorylase Kinase; domain 1 105 188 - -
Mal5g5493 551 SUPERFAMILY Protein kinase-like (PK-like) 87 385 IPR011009 -
Mal5g5493 551 MobiDBLite consensus disorder prediction 1 84 - -
Mal5g5493 551 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Mal5g5493 551 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 545 - -
Mal5g5493 551 Pfam EF-hand domain pair 409 469 IPR002048 GO:0005509
Mal5g5493 551 Pfam EF-hand domain pair 479 541 IPR002048 GO:0005509
Mal5g5493 551 ProSiteProfiles EF-hand calcium-binding domain profile. 512 546 IPR002048 GO:0005509
Mal5g5493 551 ProSiteProfiles Protein kinase domain profile. 103 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5493 551 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5493 Mal-Chr5 129553036 129557723 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5493 37 543 EF-hand Containing Proteins AT4G04720 76.938 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal5g5493 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5493 K13412 - gmx:100816859 880.167