Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5489 ATGGGTTGTCACGCTAGCAAGGAAATGAAACCAATGGTGAACGAGGAGTATAACAGAAACATAAAGATGGCTGAGCTTGATGCCAATCGTCGATCAGCCGCCATCACAGATAGTGTGGCTGATGACGAAGGTACTAGTTATCGGTACATCACTGTTTCATCGTATTCCGATAAGATTCAGATCTCTTCAACACCACCATCACTTGCTACACCGGTGACACCACCGCCAAAAGCAGACTCACTTGCTCCACAAGTGACACAACCACCAAAACCTGAACCCTCTGTTACACCCGAAAATACAAAAACCATGCAGAAGACTGACAGAACCATATTAGGAAAACCCTATGAAGATATCAAAAAGTTGTACACTTTTGGTAAAGAATTGGATATAGGGCAATTTGGAGTTACTTATTTATGCACGGAGAATTCCACGGGCCGAAGTTATGCATGTAAGTCTATATTAAAGAGGAAGCTTGTGTCGAAAGCCGATAGAGAAGATGTTAAAAGAGAGATTCAGATTCTGCAACATTTGTCTGGTCTACCAAATATTGTGGTGTTTAAAGGTGCTTTTGAAGATAGGTTATCTGTGCACCTTGTGATGGAACTTTGTGCTGGTGGGGAACTATTTGATAGAATCCTTGCTCAGCCTCAAGGTTATTCAGAGAAAGCTGCTGCATCCATTTGCAGGGCTATTGTCAATGTTGTGCACATTTGTCATATCATGGGTGTTATGCACCGTGACTTAAAGCCGGAGAATTTCTTGCTCTCTATCAAGGGAAGAGGTGTAGCACTCAAGGCTATTGATTTTAGACTCTCTGTCTTCATTGAAGAAGGAAAGGTTTATGATGATATGGTAGGTAGTGGTTGCTATGTTGCTCCTGAGGTACTGCTTCATAGTTATGGAAAAGAAATAGACATTTGGAGTGCAGGCATCATATTGCATATTCTACTTAGTGGTAGACCACCTTTTTCGCCTGGGTTAATTTTCTTTGCAGAAACTGGTGAGGGACTATTGAATGCCATTTTGGAAGGTGAACTTGACTTAGTGAGTGAGCCATGGCCATCAATATCAGACAGTGCTAAAGATCTAGTTAGGAAGATGCTGACACCGGATCCAAAGAAGAGAATCACTGCTAAGCAAATCCTTGAACACCCGTGGATGAAACAAGGTGGAGTGGCCTCCGATAAACCGATGGATAGTGCAGTTCTATCTAGAATGAAACAGTTCAGGGCAATAAATGCGTTCAAGAAACTTGCATTGAAGGTTATGGCTGATAATCTATCGGAAGAGGTTAACAGTCTCAAGGTCATGTTCGCAAATATGGACACTGATAGTAGCGGTACCATAACATGTGAAGAACTAAAGACAGGCTTGGCTCGGATTGGATCAAAATTGTCTGAGGCTGAAGTGAAACAACTTATGGAAGCTGTTGGCGTTGATGGAAATGGATCGATTGACTATCTGGAATTCATATCGGCTACATTGCATAGGAATAGGCTTGAGCGAGATGAACATATTCAGAAGGCATTTCAGTATTTTGATAAAGACAATAGTGGGCATATTACTAGAGAGGAATTGGAGAGTGCCATGACAAAGTATGGAATATGTGATGAAGCAACAATAAAGGAAATAATTTCTGAGGTGGATACTGATAATGATGGGAAAATAAACTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCCGCACAAGGGACCGCTATTTTAA 1731 0.4142 MGCHASKEMKPMVNEEYNRNIKMAELDANRRSAAITDSVADDEGTSYRYITVSSYSDKIQISSTPPSLATPVTPPPKADSLAPQVTQPPKPEPSVTPENTKTMQKTDRTILGKPYEDIKKLYTFGKELDIGQFGVTYLCTENSTGRSYACKSILKRKLVSKADREDVKREIQILQHLSGLPNIVVFKGAFEDRLSVHLVMELCAGGELFDRILAQPQGYSEKAAASICRAIVNVVHICHIMGVMHRDLKPENFLLSIKGRGVALKAIDFRLSVFIEEGKVYDDMVGSGCYVAPEVLLHSYGKEIDIWSAGIILHILLSGRPPFSPGLIFFAETGEGLLNAILEGELDLVSEPWPSISDSAKDLVRKMLTPDPKKRITAKQILEHPWMKQGGVASDKPMDSAVLSRMKQFRAINAFKKLALKVMADNLSEEVNSLKVMFANMDTDSSGTITCEELKTGLARIGSKLSEAEVKQLMEAVGVDGNGSIDYLEFISATLHRNRLERDEHIQKAFQYFDKDNSGHITREELESAMTKYGICDEATIKEIISEVDTDNDGKINYEEFCAMMRSGMPHKGPLF* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5489 576 ProSiteProfiles EF-hand calcium-binding domain profile. 465 500 IPR002048 GO:0005509
Mal5g5489 576 SUPERFAMILY EF-hand 429 565 IPR011992 -
Mal5g5489 576 ProSitePatterns EF-hand calcium-binding domain. 514 526 IPR018247 -
Mal5g5489 576 Gene3D - 395 568 - -
Mal5g5489 576 Gene3D Transferase(Phosphotransferase) domain 1 208 394 - -
Mal5g5489 576 Gene3D Phosphorylase Kinase; domain 1 124 207 - -
Mal5g5489 576 MobiDBLite consensus disorder prediction 60 105 - -
Mal5g5489 576 Pfam EF-hand domain pair 504 566 IPR002048 GO:0005509
Mal5g5489 576 Pfam EF-hand domain pair 434 493 IPR002048 GO:0005509
Mal5g5489 576 ProSiteProfiles EF-hand calcium-binding domain profile. 501 536 IPR002048 GO:0005509
Mal5g5489 576 SMART serkin_6 122 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5489 576 MobiDBLite consensus disorder prediction 68 95 - -
Mal5g5489 576 ProSitePatterns EF-hand calcium-binding domain. 549 561 IPR018247 -
Mal5g5489 576 CDD EFh 505 566 IPR002048 GO:0005509
Mal5g5489 576 SMART efh_1 469 497 IPR002048 GO:0005509
Mal5g5489 576 SMART efh_1 433 461 IPR002048 GO:0005509
Mal5g5489 576 SMART efh_1 505 533 IPR002048 GO:0005509
Mal5g5489 576 SMART efh_1 540 568 IPR002048 GO:0005509
Mal5g5489 576 ProSitePatterns EF-hand calcium-binding domain. 442 454 IPR018247 -
Mal5g5489 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Mal5g5489 576 PANTHER SERINE/THREONINE-PROTEIN KINASE 82 570 - -
Mal5g5489 576 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 82 570 - -
Mal5g5489 576 ProSiteProfiles Protein kinase domain profile. 122 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5489 576 ProSiteProfiles EF-hand calcium-binding domain profile. 537 571 IPR002048 GO:0005509
Mal5g5489 576 CDD STKc_CAMK 122 386 - -
Mal5g5489 576 Pfam Protein kinase domain 122 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5489 576 SUPERFAMILY Protein kinase-like (PK-like) 104 412 IPR011009 -
Mal5g5489 576 ProSiteProfiles EF-hand calcium-binding domain profile. 429 464 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5489 Mal-Chr5 129539690 129542880 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5489 66 568 EF-hand Containing Proteins AT4G04720 70.040 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal5g5489 Pkinase 4.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5489 K13412 - gmx:100816859 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5489 5 129539690 129542880 Mal5g5489 5 129539690 129542880 ECH