Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5477 ATGGAAGAAGGTAACAACAACGAGCTTCCATGTCCATCACCCTCACCTTTTCGCTCTTCTTCACTTCTCAAAGACATTTCAAACTTCAAAACCCCAAAACGCGCTTCTTCTTCTTCTTCTTTTCTCTCTCAACAATCTCCTTCCACTCAATACTTCACCGCTTCCAAATACAAACACACCACCACACTCCCTCGTCGCCCTAACAAATCTTCTTCTTCAGCAGCTGCTTCAAAGAAACTCAGAGCATTTCAACTCGAACAATCTCACTCTTCTCGAATCGCACAAATCAAAAAAGAACAATCGCTCAAATCGTTAGCCAAATCGCTCACTGTTTGGCTCAATTTTCTTCTTGAATCCCCTGCTTCATGCGGTTGCGACATTTCCATCGCCGGAAGTCAGATCTCCAATGCTTCGCCGGTGGCTACCAAGGGGAAACGTGATAATGTTCCGGGAAATTCGGTTGGAGTTGATTCTACTTGGAGAACTCCCAAACGCCAGAGGAAGATGGCGACTAATTGTTCCTCGCGCGTTCGTAAGGAGAATGTATCTGTGGTGGATTTGCAGAATTCATCGTTTTCGCGTTTAAAGGATTCTTTGAAGGATGTGTGTAGTTTCGATGATTTTAAGCAGCGGATGAGTGTCTATTTGAGCCTCGGAACTTGTGAAGATATCTTCCAAGTCATGAATCAAGTCACTAAGACGATTGACGAAGGAAGGCTAAATATGAAGGCACATTGCCCGATAGTGACAGATTTAGGGTTGAAGGATAAGGCCATAAAAGTCCTTATGTGCTATAATCCAAGTTGGTTGCGAATCGGATTATATATAATTTTTGGTGGGGACTCTTTAGTGTCAAATGGGGATGGTGATTCTGATAAAGATGTTATGTTTCTAAAAATGGTCATAGACAAACTGTTTTTTACACATGAGGGTTTAGCAAAAGCTTATGCATATAACAAGATGGTTGAAGGAGTTTATAGGTCTGGTTACTATGAGAATTTGGGGAATGTGATTTTGAAGAGAATGTTGTTGCTTGTGCTTATACTTGATAAAGCTAAGTGTCAAAGTTGCCTACCGATTGAGTATGGTATTGATGGATTGGATGGTGGTTCCCCGTTATTGATCAAAGCAGAAACGTGGGTTAAATCCAGTAGTCAAGTGATCCAGGAATTTCTGTCATCTGATGTAATGCGCGGAGAAGGCAATCTTCTAACACATTTGATAATTTTAGGTTACAAAGTATCTCACCAACAGGGGCCTCTTGTTGAGTATGATTTCTGGGTCAGAGATTTATTTGTAGATCTCCAAGACGGACTAAAATTGTGTAGAGCTATTCATCTCTTGCAAAATAATTCTTCTATACTCAAGAAAATTGTAGTTCCTTCTGACACCCGTAAGAAAAATATGGTGAACAGTAGTGTTGCCCTACAATATCTTAGACTAGCCGGAGTTTCACTACTTGATGAAGACGACATAATGATTGTAGCAGATGATATTGTTAATGGAGATAAAGAACTTACAATTTCTTTGCTCTGGAATATGTTTGTTCACTTGCAGCTACCTTTGTTGGTTGATAAAACAAGTTTAGTTGGGGAGATTTCTAAAATTCGCGGACTTGGCACGGATCTCATAAACGGTGAAAATTCTAGTTCTTTGGAATTGCTTTTGAAATGGATTCAGGCTGTTTGTGATCATTATAACTGCCCAGTTGAAAGTTTTCACTCCCTTGTTGATGGCAAAGCAATCTGGTGCTTACTTGATTATTACTTCCAGAAGGAACTTCACAATGTCTGTTCGTTGAAGGAAGTTTATGAAAAAAGTGGCAAGACATCGATTATGTCAGTGAATGAGTATTCGGATGCACTGTACAATTTCATATTATCCCAGAAATTGACCACATTACTGGGGAATTTTCCTGAGGTACTTCAGATTAGTGAGCTACTACAGTATAATGGCGCTTGCAGTGATCGAAGTGTGGTGATATTGGTTGTTTTCCTGGCAAGCCAATTATTTGTCAAGAAAAAAGTGGATAACTTAAATTTTCATAAGCTATTAGGTTATGACTGCCAAATCACAAATCGTAGGAATTCGAGGACAGTACAGTGCCATTCCAGTTCTGAATCAGCACAAAAGCCTTATGCTACAGATGTGTGTGACAATGAAGATGCGGCAAGAAAATTCAAGGCCATTCAGACTTGGTGGCAAGATATGGCCGATCAAAACTGTATTGTGCAGCCAACTGTCTCTATTTTGCAGACATCTAGGACCGCAGAATGCAACATTGCCGTCAGAAGAGAAAATGCTGCAATAACAATACAATCACATATCAGAGGATTGGTTGTACGACGCAAGTTTCTCAAGATTGTAAATGGTGTTATCCTTTTGCAGACCGTTTTCAGAGCTTGGCTGAAAGTGAGGCAGGAGTCAGTCTGCATCTATGATTTTTCATGTGAAAGTTTGAAGCAATCCGAAGTATATGTGAGGTATGCCATGCTTTTCTATCATAGGCATTCTTTTTTGAGGTTGAAAAGGTCAGCACAGCTTATCCAGCATGCAGTGAGGAGTTGGCTCTATTGGAGATCTCAACAAAGATGTAGTTTAAGTCCTGACCTCATGATTTCAGACACGGTGACTGCTGCCATTACTGTTCAGAAATTTGTCCGTCGTTGGATGGCGCGATCTAGATATATTCATCAGCTAGATCAAAAAGAAAAAGCTTTAAATTTAGCTGAACAGAAACTTATCATTGATCTTAGAACAAAGGCAGCCGTTAACATTCAGCTTGCTTGGAAAAACTACATATGCTGCAAGTGTACAAGGAAAGAGCACTTGTTTGCAACTAAAATTCAATGTCATTTCCGTAGGTGGTTATTGAGGAAACAATTTTTAAATCAGATTCAAGCTGTCATAAAAATCCAATCATATTTTCGAATGTGGAGATGTGTGAAAGCTATTCAGAACTTCAAAACCATGTTTAAGGCTGCTATTGTCATTCAATCTTATTTACGTGGATGGATTGCTCGGAAGAATGCTTGTGCTCGTAAGAATCAAATTGTTGAGATTCAAAGGCATTGCCGCGGTTGGCTTGTGAAACGGAATTTCTTATTTCAAAGAGATGCTATAGTAAAGATCCAGAGTGTCAGTCGAAGTTTGAAATGCCAGAAGACACTCAATTGTCAGAAAGATGCTGCATTGGAGATCCAGCGCTTCATCAGGGGGCATTTAACTCGAAATCAGCTATTAGGTAGTGCTTCCAAGTTGCGTGCAACTGATACTGGTAGTTGCATTTCAAGACCCTTACATAGTTTTCAACTTGAAGCATTCATGTCTGCGGTAGTGAAATTGCAACGATGGTGGAAGGGTCTTTTGATGCTTAAATTAATGACTAAATCAGCCATCGTAATCCAGTCTTGTACTCGTGGGTGGATAGCCAGGCGAAAGGCCACAGTTGAGACACATCATATTAACGTCATGGAAGAATATGCTGCATTGGAGCTCCAGCGCTATATTAGGGGGCATTTAACACGAAATTTAATATTAGGCAGTGCTTCTAAGCTACGTGCAGCTGCTGCTGGATGCATTTCAAAACCAACTGGCTGTTGTAGTTTTCAGTTGGAACTATTCTTGTTTCAAGTAGTGAAATTGCAACGATGGTGGAAGCATCTCTTGTTACATAAATTGATGACAAAGTCTGCAATCATTATACAGTCTTACATTCGTGGATGGGTAGCTAGGCGAAAGGCCATTGCTTGTAGACATCATATCGTTGTCATACAGTCCCACTGGAAAGGTTACATTGCACGTCAGCAGTCAACAAAACAACTAATGGATTTGCGCTTGAGACTTCAAGAGTCTTCAAAAAATGTGGATGACAGCAAGCGTCTCATTAACAGACTCTTGGCAGCGCTTTCAGAGCTACTTAATATGAAGAGTCTCAGTGACATTCTTCATACTTGTTCAACATTGGATTTGGCGACATGGCATTCTCAGAGATGTTGTGAAGAACTTGTGGCTGCTGGGGCTATTGACACCTTGCTGCGGCTTATTCGATCAATCAGCAGGAGTATCCCTGATCAAGAGGTTTTAAAGCATGTTTTGTCAACTCTCCGAAATCTTGCTCGCTATCCTCATCTGCTTGAAGTGCTGATACAAAGACAGGGTTCTATACAGACAATCGTCTTGGAGTTACTGAGGAATAAGGAGGAGGGCTTCTTCATTGCTTCTGAGCTTTTGAAGAAGATATGCTCAACTCAAAAAGGCGTTGACACCATCCTCAAATCTCCTGCCTTTCTAAAGAGACTGCACAGTCTTGTTGAGGAGCTTACTAGGAAGGCCACTTACCAGAAAAGAAATGTTCGGGGTCCTACTCCTAGTTCAGTTGTTATTGTTAGAGAAAACACAGATAGAAGATTGAAGGAGGTTACTGAGATTCTAAAGCTACTAACGCACCCTTGA 4455 0.4056 MEEGNNNELPCPSPSPFRSSSLLKDISNFKTPKRASSSSSFLSQQSPSTQYFTASKYKHTTTLPRRPNKSSSSAAASKKLRAFQLEQSHSSRIAQIKKEQSLKSLAKSLTVWLNFLLESPASCGCDISIAGSQISNASPVATKGKRDNVPGNSVGVDSTWRTPKRQRKMATNCSSRVRKENVSVVDLQNSSFSRLKDSLKDVCSFDDFKQRMSVYLSLGTCEDIFQVMNQVTKTIDEGRLNMKAHCPIVTDLGLKDKAIKVLMCYNPSWLRIGLYIIFGGDSLVSNGDGDSDKDVMFLKMVIDKLFFTHEGLAKAYAYNKMVEGVYRSGYYENLGNVILKRMLLLVLILDKAKCQSCLPIEYGIDGLDGGSPLLIKAETWVKSSSQVIQEFLSSDVMRGEGNLLTHLIILGYKVSHQQGPLVEYDFWVRDLFVDLQDGLKLCRAIHLLQNNSSILKKIVVPSDTRKKNMVNSSVALQYLRLAGVSLLDEDDIMIVADDIVNGDKELTISLLWNMFVHLQLPLLVDKTSLVGEISKIRGLGTDLINGENSSSLELLLKWIQAVCDHYNCPVESFHSLVDGKAIWCLLDYYFQKELHNVCSLKEVYEKSGKTSIMSVNEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACSDRSVVILVVFLASQLFVKKKVDNLNFHKLLGYDCQITNRRNSRTVQCHSSSESAQKPYATDVCDNEDAARKFKAIQTWWQDMADQNCIVQPTVSILQTSRTAECNIAVRRENAAITIQSHIRGLVVRRKFLKIVNGVILLQTVFRAWLKVRQESVCIYDFSCESLKQSEVYVRYAMLFYHRHSFLRLKRSAQLIQHAVRSWLYWRSQQRCSLSPDLMISDTVTAAITVQKFVRRWMARSRYIHQLDQKEKALNLAEQKLIIDLRTKAAVNIQLAWKNYICCKCTRKEHLFATKIQCHFRRWLLRKQFLNQIQAVIKIQSYFRMWRCVKAIQNFKTMFKAAIVIQSYLRGWIARKNACARKNQIVEIQRHCRGWLVKRNFLFQRDAIVKIQSVSRSLKCQKTLNCQKDAALEIQRFIRGHLTRNQLLGSASKLRATDTGSCISRPLHSFQLEAFMSAVVKLQRWWKGLLMLKLMTKSAIVIQSCTRGWIARRKATVETHHINVMEEYAALELQRYIRGHLTRNLILGSASKLRAAAAGCISKPTGCCSFQLELFLFQVVKLQRWWKHLLLHKLMTKSAIIIQSYIRGWVARRKAIACRHHIVVIQSHWKGYIARQQSTKQLMDLRLRLQESSKNVDDSKRLINRLLAALSELLNMKSLSDILHTCSTLDLATWHSQRCCEELVAAGAIDTLLRLIRSISRSIPDQEVLKHVLSTLRNLARYPHLLEVLIQRQGSIQTIVLELLRNKEEGFFIASELLKKICSTQKGVDTILKSPAFLKRLHSLVEELTRKATYQKRNVRGPTPSSVVIVRENTDRRLKEVTEILKLLTHP* 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5477 1484 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 9 1158 - -
Mal5g5477 1484 Pfam Calponin homology (CH) domain 428 517 IPR001715 GO:0005515
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 1159 1188 IPR000048 GO:0005515
Mal5g5477 1484 Gene3D - 1038 1091 - -
Mal5g5477 1484 Gene3D - 1227 1273 - -
Mal5g5477 1484 Gene3D - 941 991 - -
Mal5g5477 1484 Gene3D - 764 811 - -
Mal5g5477 1484 Gene3D - 1127 1191 - -
Mal5g5477 1484 Gene3D - 992 1037 - -
Mal5g5477 1484 Gene3D - 546 671 IPR036872 -
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 1128 1156 IPR000048 GO:0005515
Mal5g5477 1484 MobiDBLite consensus disorder prediction 138 158 - -
Mal5g5477 1484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 994 1080 IPR027417 -
Mal5g5477 1484 Gene3D - 1274 1447 IPR011989 -
Mal5g5477 1484 Gene3D - 414 519 IPR036872 -
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 991 1020 IPR000048 GO:0005515
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 942 971 IPR000048 GO:0005515
Mal5g5477 1484 PANTHER UNCHARACTERIZED 1160 1483 - -
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 1129 1147 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 879 896 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 1255 1270 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 946 962 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 967 984 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 1229 1247 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 1062 1080 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 767 785 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 1162 1177 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 993 1010 IPR000048 GO:0005515
Mal5g5477 1484 Pfam IQ calmodulin-binding motif 1018 1034 IPR000048 GO:0005515
Mal5g5477 1484 Coils Coil 893 913 - -
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 1252 1279 IPR000048 GO:0005515
Mal5g5477 1484 SMART arm_5 1329 1374 IPR000225 GO:0005515
Mal5g5477 1484 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1340 1387 IPR000225 GO:0005515
Mal5g5477 1484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 917 1011 IPR027417 -
Mal5g5477 1484 SUPERFAMILY Calponin-homology domain, CH-domain 344 591 IPR036872 -
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 1228 1255 IPR000048 GO:0005515
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 878 905 IPR000048 GO:0005515
Mal5g5477 1484 SUPERFAMILY ARM repeat 1297 1439 IPR016024 -
Mal5g5477 1484 Coils Coil 1268 1288 - -
Mal5g5477 1484 Pfam Armadillo/beta-catenin-like repeat 1330 1374 IPR000225 GO:0005515
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 1014 1043 IPR000048 GO:0005515
Mal5g5477 1484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1215 1275 IPR027417 -
Mal5g5477 1484 SMART iq_5 1158 1180 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 875 897 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 1250 1272 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 941 963 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 1013 1035 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 964 986 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 1059 1081 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 1227 1249 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 990 1012 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 1127 1149 IPR000048 GO:0005515
Mal5g5477 1484 SMART iq_5 764 786 IPR000048 GO:0005515
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 765 792 IPR000048 GO:0005515
Mal5g5477 1484 MobiDBLite consensus disorder prediction 1 78 - -
Mal5g5477 1484 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1160 1483 - -
Mal5g5477 1484 PANTHER UNCHARACTERIZED 9 1158 - -
Mal5g5477 1484 ProSiteProfiles IQ motif profile. 1060 1089 IPR000048 GO:0005515
Mal5g5477 1484 ProSiteProfiles Calponin homology (CH) domain profile. 397 519 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5477 Mal-Chr5 129408127 129418872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5477 921 1066 Myosins gene family AT1G04160 29.333 1.99e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5477 K16743 - gmx:100817636 1614.36