Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5439 ATGGCTATTAGAAAACCCCCATTCCCTTGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCCCAGCAAATTCTGTCTAATGTAAATGTCTCTCTTCATGATGGAGGGGCACTTGTGCTAACAGGTGCAAATGGCTCGGGAAAGTCCACTTTCATGCGTATGTTAGCTGGGTTTTCTCGTCCTTCTGCAGGCGAAATCCTTTGGAATGGCCATGACATTCAAAAATCTGAAATCTTCCATCAGTATAAGAATCAGCTTAACTGGGTCTGCCTCAAGCATGCAATTAATGAAAAGTCTACTGTTCTGGACAATGTTGAGTTGTTTGAACTTCTTGATTACAAGCACGGGAAGGCTATGCCTGCACTTGAGTTGATGGGACTCGGAAGATTGGCTTTGGAAAAGCCAAAGTTGCTTTCAATGGGCCAGCGGAAAAGATTGCAACTTGCCAGATTGCTTGCAATTGATCGTCCCATATGGTTGCTAGACGAGCCTTCAGTTGCATTAGATGATGAAGGTGTAAAGTTACTCGAGTATATTATTGAAGAACACAGAAAACAGGGAGGAATTGTGATTGTTGCGACTCATTTACCCATTGAGATAGAAGATTCCATGCACTTGAGGCTGCCACCAAGGTTTCCAAGGAGGATGACATTTGTAGATATGCTTGACCGGGCGGATATTAGTTAA 690 0.4319 MAIRKPPFPCLLLNNVSCMRNAQQILSNVNVSLHDGGALVLTGANGSGKSTFMRMLAGFSRPSAGEILWNGHDIQKSEIFHQYKNQLNWVCLKHAINEKSTVLDNVELFELLDYKHGKAMPALELMGLGRLALEKPKLLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIEEHRKQGGIVIVATHLPIEIEDSMHLRLPPRFPRRMTFVDMLDRADIS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5439 229 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 209 IPR005895 GO:0017004|GO:0022857
Mal5g5439 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 229 IPR003439 GO:0005524
Mal5g5439 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Mal5g5439 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 203 IPR027417 -
Mal5g5439 229 Gene3D - 7 207 IPR027417 -
Mal5g5439 229 SMART AAA_5 35 223 IPR003593 -
Mal5g5439 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 223 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5439 Mal-Chr5 129005873 129006562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5439 24 197 Calmodulin-binding Proteins AT2G36910 27.083 9.52e-11 59.3