Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5433 ATGGCTGGGAATGGAGTGCTTTCAGAGATTTTAGATGGAGATGTATACAAATATTATGCTGATGGAGAATGGAAGAAATCTACCTCTGGCAAAAGTGTTGCTATCATCAATCCTACTACCAGAAAGCCTCAATACAAAGTTCAAGCTTGTTCACAAGAGGAAGTTAATAAGGTTATGGATTCAGCAAAATCAGCACAAAAGTCATGGGCAAAGACCCCACTTTGGAAGAGAGCTGAACTTCTTCACAAGGCAGCTGCAATCCTCAAAGAACACAAAGCTGCAATAGCAGAGTGCTTAGTCAAAGAAATAGCAAAGCCAGCCAAAGATGCAGTTACAGAGGTTGTAAGATCTGGTGATTTGGTTTCTTACTGTGCTGAAGAAGGAGTAAGGATTCTTGGAGAGGGAAAGTTCTTGGTTTCAGATAGCTTTCCTGGAAATGAAAGGACCAAATATTGCCTCACTTCTAAGATCCCATTGGGAGTGATTTTAGCCATTCCACCTTTTAACTATCCTGTCAATCTTGCTGTCTCAAAAATTGCTCCTGCGCTGATTGCTGGAAATTCTATTGTGCTCAAGCCTCCAACTCAGGGAGCTGTTGCAGCTCTTCACATGGTTCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGTCTAATCAGCTGTGTTACTGGCAAAGGCTCAGAAATTGGTGACTTTCTTACAATGCATCCAGGAGTGAACTGTATAAGCTTCACTGGTGGAGATACTGGCATTGCAATTTCAAAGAAGGCAGGCATGATTCCTTTACAAATGGAATTGGGGGGAAAAGATGCTTGCATTGTACTTGAAGATGCTGACCTTGATTTGGTTGCTGCAAACATTATAAAAGGAGGTTTTTCATACAGTGGTCAGAGGTGTACTGCTGTTAAGGTTGTTCTGGTAATGGAATCAGTTGCTGATGCTTTGGTTGAGAAAGTGAAGGCAAAGGTTGCAAAACTAAGTGTTGGACCACCTGAGAATGACTGTGATATCACACCAGTTGTATCAGAATCATCAGCCAATTTCATTGAAGGCTTGGTGAATGATGCCAAACAGAAAGGAGCAACATTCTGCCAGGAATACAAGAGAGAAGGGAATCTCATTTGGCCTTTGTTATTGGATAATGTTAGGCCAGATATGAGAATTGCATGGGAGGAGCCATTTGGACCAGTTTTACCTGTAATTAGGATCAATTCTGTTGAAGAAGGTATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGGATGTGTATTCACAAAGGATATCAACAAAGCAATAATGATAAGTGATGCAATGGAATCAGGAACAGTTCAGATAAATTCTGCCCCAGCTCGTGGGCCAGATCATTTTCCCTTTCAGGGTATAAAAGACAGTGGAATTGGATCACAAGGAATTACCAACAGCATAAACATGATGACAAAAATCAAAACTACTGTGATAAACTTGCCTAGCCCTTCTTATACCATGGGCTAA 1491 0.4125 MAGNGVLSEILDGDVYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVKAKVAKLSVGPPENDCDITPVVSESSANFIEGLVNDAKQKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAIMISDAMESGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKIKTTVINLPSPSYTMG* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5433 496 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Mal5g5433 496 Pfam Aldehyde dehydrogenase family 24 483 IPR015590 GO:0016491
Mal5g5433 496 CDD ALDH_F11_NP-GAPDH 15 487 - -
Mal5g5433 496 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 496 - -
Mal5g5433 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 457 IPR016163 GO:0016620
Mal5g5433 496 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Mal5g5433 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 483 IPR016162 GO:0016491
Mal5g5433 496 SUPERFAMILY ALDH-like 16 487 IPR016161 GO:0016491
Mal5g5433 496 PANTHER ALDEHYDE DEHYDROGENASE 1 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5433 Mal-Chr5 128969849 128974126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5433 1 496 Aldehyde Dehydrogenase Gene Family AT2G24270 89.718 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5433 K00131 - gmx:100789100 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5433 5 128969849 128974126 Mal5g5433 5 128969849 128974126 ECH