Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5432 ATGCAGCCTTGTAGCAGAGAAATGCAATCTCTTAACTCCCTCTTCAACTCTTCTTCTTCTTCTGAAATCCCCATTAATCCTCTCCAAAATCACTCACAGATCCCAATTAACAACAATGACACATTCAACAACCATGACGATTTTCTCAAACAAATCCTCTCCACCAATCTTCCTCCTTCCTGGAACACTCTCGACCCTAACAACCCTAATAAACCCTTATTATGGGACCCCAATTCCGACGAAAATCTCACTTTCCCTAACTACGATGAACAACACAACAACCTCGCCTCCAAGTTTCGTAACCATCAGATCAATGACAAAACCGCCGCCGCTCTCATGCTTCTCACCGCCGATTCCGGAGGTCTCCTCCACATGCCCTCTGACTTTGACTCCTCCCAAAACGACGTCGTTAACCCCTCCTCCGCTGGTACTGGTGACGCTTCCGTTCAAGCTCTCTTCAACGGGTTCTCCGGATCTCTTCACGGTGTTGCTCAACCTCACCATTTTCAACCTCCTCAGGGTCAGAGTTTTGGAGGTGGTTCAGTGAGTGCAACTAATCAGGCTCCGGCGAGTGGTGCGCCGGCTCAGCCGAGGCAGAAGGTGAGGGCAAGGAGAGGTCAAGCAACCGATCCACACAGCATTGCTGAGAGGTTACGGAGGGAAAGAATTGCTGAGAGAATGAAAGCATTGCAGGAACTTGTTCCTAATGCCAACAAGACAGACAAGGCCTCCATGCTGGATGAGATCATCGATTATGTTAAGTTTCTACAAGTCCAAGTCAAGGTTTTAAGTATGAGCAGATTAGGTGGAGCAGGCGCTGTAGCTCCTCTTGTGGCTGATATGTCCTCCGAGGGTGTCAGTGACTGCGTCCAAAACAACGGCAACGGTGGGGTCCACCCACGAAACCCTAAAACGGCGTCGTCTTCAAACGAAAGCCTCACAATGACGGAGCATCAGGTTGCAAAGCTGATGGAAGAAGACATGGGATCTGCCATGCAATACTTGCAAGGCAAAGGTCTTTGCCTCATGCCTATTTCTCTTGCTACAGCTATCTCCACTGCCACGTGTCACACCAGGAACCCTTTGATCAACGCCGCAAATAACAATATCAACGGTAGTTCCAACCCTATCACCGCATCTAACGGTGATGGGCCATCCTCTCCCGGAATGTCCGTTAATAGCATCGTTAAAGATGCTAACTCCGCTTCAAAGTCATAG 1218 0.491 MQPCSREMQSLNSLFNSSSSSEIPINPLQNHSQIPINNNDTFNNHDDFLKQILSTNLPPSWNTLDPNNPNKPLLWDPNSDENLTFPNYDEQHNNLASKFRNHQINDKTAAALMLLTADSGGLLHMPSDFDSSQNDVVNPSSAGTGDASVQALFNGFSGSLHGVAQPHHFQPPQGQSFGGGSVSATNQAPASGAPAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAPLVADMSSEGVSDCVQNNGNGGVHPRNPKTASSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINAANNNINGSSNPITASNGDGPSSPGMSVNSIVKDANSASKS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5432 405 Gene3D - 202 264 IPR036638 GO:0046983
Mal5g5432 405 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 38 365 - -
Mal5g5432 405 MobiDBLite consensus disorder prediction 169 193 - -
Mal5g5432 405 PANTHER TRANSCRIPTION FACTOR BHLH69 38 365 - -
Mal5g5432 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 256 IPR011598 GO:0046983
Mal5g5432 405 SMART finulus 213 262 IPR011598 GO:0046983
Mal5g5432 405 MobiDBLite consensus disorder prediction 1 32 - -
Mal5g5432 405 MobiDBLite consensus disorder prediction 293 313 - -
Mal5g5432 405 MobiDBLite consensus disorder prediction 163 211 - -
Mal5g5432 405 MobiDBLite consensus disorder prediction 367 405 - -
Mal5g5432 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 266 IPR036638 GO:0046983
Mal5g5432 405 Pfam Helix-loop-helix DNA-binding domain 212 257 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5432 Mal-Chr5 128960744 128964140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5432 193 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 72.973 4.56e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g5432 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5432 - - gmx:100807286 400.208