Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5427 ATGGCTATGCTCCGCAAGTTGTTCTTTCGTAAGCCTCCTGATGGTCTCCTCGAGATCTGCGACAGAGTTTACGTTTTCGATTGCTGTTTCACAACGGAAGCTTGGAATGAAGAGAAGTATAAAGTGTATATGGATGGTATAGTAGGTCAGCTTAGGGAGAATGTGCCTGATGCGTCTATTCTGGTTTTCAATTTTCGGGAGGAAGAGACCAAGAGTTTGATGGCAAACATAATATCTGAGTATGATATTACTATAATGGACTATCCTAGGCATTATGAAGGTTGTCCTGTGCTGAAAATGGAGCTCATTCACCACTTTTTAAGGTCTAGTGAAAGCTGGCTTTCACTTGGTCAACACAACGTGTTGTTGATGCATTGTGAACGTGGTGGTTGGCCGGTTTTGGCTTTCATGTTGGCTGCATTGTTGATTTATCGGAAGATTTATACTGGCGAGCATAGGACTTTGGATATGGTTTATAGGCAGTCCCCGCACGAGCTTTTGCATTTGTTGACGCCGTTGAATCCAATCCCTTCCCAATTGAGGTATCTGCAGTATGTTTCTAGGAGAAATGTGGCCTTAGATTGGCCTCCGCTCGACAGGGCACTCATGTTGGACTGTATTATTCTTAGATTCTTCCCAAACTTTGACGGGGAAGGTGGTTGTCATCCCTTGTTTAGAATTTACGGACAAGATCCTTTTAGTTCAGATAAAAGTCCTAAAATGTTGTACTCAATGCCAAAGAGAAGCAAAAATATCCGGGCTTACAAGCAGATTGAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAGGTGCCATTGCATGATTTAATGAGCTCAGTGCTAGCACTAGAAGAATCAGCACTAGACACTGATACGGTCGAGAACCTCATAAAATTTTGTCCTACAAAAGAGGAGATGGAGATAATTAAGAGTTATAACGGAGAAAAGGAGAAATTAGGGAGATGTGAACAGTTCTTCATGGAGTTGATGAAAGTACCACGGGTAGAATCTAAGCTCCGGGTATTTTCATTCAGGATTCAGTTCCATTCTCAGGTTTCTGATCTTAGAAATAGCCTAAATGTTGTGAATTCTGCTGCAGAAGAGATCAGGAATTCTGTCAAATTGAAGAGAATTATGCAAACAATACTTACTCTAGGAAATGCTTTGAATCAAGGAACTGCCAGGGGTTCTGCTATTGGATTCAGATTAGATAGCCTTCTTAAACTCACTGAGACACGTGCACGGAACAACAAAATGACTCTCATGCATTATCTTTGTAAGGTGTTAGATGACAAATTGCCAGAAGTTTTAGACTTCTCTAAGGATCTTGCTAACCTAGAGCCAGCGGCAAAGATCCAATTGAAGTTTCTGGCAGAGGAGATGCAAGCTATAAACAAAGGGTTAGAGAAAGTTGTCCAGGAATTATCCACTTCTGAAAATGATGGTCCTATATCAGAAACGTTCTGCAAGAAATTGAAAGGGTTCCTCTGTTCCGCTGAAGCTGAAGTCCGAACATTGGCCTTACTATATTCTGGTGTGGGCAGGAACGTGGATGCGTTGATACTTTATTTTGGTGAAGATCCATCTCGTTGTCAATTTGAGCAAGTTGTCACAACTTTGCTCAACTTTACTCGAATGTTTAACAAAGCCCATGAAGAAAATTGCAAGCAGCTAGAGCTTGAAAAGAAGAAAGCTGCAGAAAGTGAGAAAAAGAAATTTGAATCAGAAAGGATATTACCTACAGCAATCCGGGCAGGCAATGTCAAATAA 1782 0.4102 MAMLRKLFFRKPPDGLLEICDRVYVFDCCFTTEAWNEEKYKVYMDGIVGQLRENVPDASILVFNFREEETKSLMANIISEYDITIMDYPRHYEGCPVLKMELIHHFLRSSESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKIYTGEHRTLDMVYRQSPHELLHLLTPLNPIPSQLRYLQYVSRRNVALDWPPLDRALMLDCIILRFFPNFDGEGGCHPLFRIYGQDPFSSDKSPKMLYSMPKRSKNIRAYKQIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDTVENLIKFCPTKEEMEIIKSYNGEKEKLGRCEQFFMELMKVPRVESKLRVFSFRIQFHSQVSDLRNSLNVVNSAAEEIRNSVKLKRIMQTILTLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLDDKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAINKGLEKVVQELSTSENDGPISETFCKKLKGFLCSAEAEVRTLALLYSGVGRNVDALILYFGEDPSRCQFEQVVTTLLNFTRMFNKAHEENCKQLELEKKKAAESEKKKFESERILPTAIRAGNVK* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5427 593 Gene3D Protein tyrosine phosphatase superfamily 15 202 IPR029021 -
Mal5g5427 593 SMART it6_source 180 593 IPR015425 -
Mal5g5427 593 Gene3D Formin, FH2 domain 249 582 IPR042201 -
Mal5g5427 593 Pfam Formin Homology 2 Domain 246 552 IPR015425 -
Mal5g5427 593 SUPERFAMILY Formin homology 2 domain (FH2 domain) 258 572 - -
Mal5g5427 593 PANTHER FORMIN-J 260 576 - -
Mal5g5427 593 PANTHER FORMIN-J 1 258 - -
Mal5g5427 593 Coils Coil 458 478 - -
Mal5g5427 593 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Mal5g5427 593 Coils Coil 552 580 - -
Mal5g5427 593 ProSiteProfiles Formin homology-2 (FH2) domain profile. 180 577 IPR015425 -
Mal5g5427 593 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5427 Mal-Chr5 128889747 128899301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5427 258 576 Protein tyrosine phosphatase (PTP) family AT5G58160 78.438 3.36e-170 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5427 - - cam:101513310 599.356