Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5418 ATGGGTTTAGGAGTATTTGGATCTGTTCTGGTTTTGACATTTTTGTTCAAGCATTTAGCTTCACAGCAACCAAACACCGATGAATTCTATGTGTCTGAGTTTTTGAAGAAAATGGGTTTAACATCATCCTCCAAAGTTTACAACTTTTCATCTTCTGTTTGTTCATGGAAAGGTGTTTTGTGTGATGCAAACAATGAACATGTTGTTGAATTGAACTTTTCTGGTATTGGTCTCACTGGTCCTATACCTGATACAACCATAGGCAAACTCAACAAGCTTCAATCTTTGGATCTTAGCAAAAACAAAATCACTTCTTTGCCTTCAGATTTTTGGAGTTTAACCTCTCTCAAAAGCCTTAACCTTTCTTCCAATCAGATTTCAGGTTCATTGACTAACAACATTGGTAACTTTGGTTCACTTGAAAACTTTGACTTGTCAAAAAACAGTTTTGCTGATGAAATTCCTGAAGCTTTGAGTTCACTTGTGAGTTTGAAAGTTCTCAAACTTGAACACAACATGTTTGTTAAAAGTATCCCTTCAGGAATTCTCAAGTGTCAGTCTTTAGTTTCAATTGATCTTTCATCAAATCAACTGGATGGTACACTTCCACATGGTTTTGGTGATGCTCTTCCTAAGCTTAGGACTTTGAACCTTGCTGAGAATAATATCTATGGTGGGGTTTCAGATTTTTCAGGGTTGAAGTCCATTGTGAGTCTCAACATATCAGGAAATTCATTTCAAGGTTCTATTATAGATGTCTTTGTGCTAAAGTTGGAGGTTTTGGACCTTAGCAGAAACCAATTTCAAGGTCACATTTCTGAGGTAAAGTACAATTGGTCTCATTTAGTTTATCTGGATTTGTCTGAGAATCAGCTTAGTGGAGAAATTTTCCAAAACTTGAACAATTCAATGAATTTAAAGCACCTTAGTCTTGCATGCAATAGATTTACAAGACAGAAATTCCCAAAGATTGAAATGCTCCTAGGATTGGAATATCTTAACTTGTCCAAAACTAGTCTTGTTGGTCACATTCCTGATGAAATCTCACAACTTGGTAATTTGAATGCACTTGATCTTTCTATGAATCATCTTGATGGAAAAATTCCCTTACTGAAAAATAAACATCTTCAAGTTATTGACTTTTCACATAACAATTTGAGTGGACCAGTCCCTTCATCTGTTTTGAAGAATCTCCCAAAGATGAAGAAATACAACTTCTCTTATAATAACTTAACCCTTTGTGCTTCAGAAATCAAACCTGATATCATGAAAACATCGTTCTTTGGATCAGTTAACAGCTGTCCAATAGCTGCAAATCCGAGTTTTTTCAAAAAAAGAAAAGACGCTGGCCACAGGGGAATGAAGCTAGCTCTTATATTAGCCCTCTCGTTGATATTCGCGCTTGCAGGTATTTTGTTTCTAGCATTTGGTTGCAGAAGGAAACATAAAATGTGGGAAGTGAAACAAGGTTCATACAGAGAAGAACAGAATATCTCAGGTCCATTTTCTTTCCAAACTGATTCAACAACTTGGGTAGCTGATGTCAAACAAGCAACATCAGTTCCGGTAGTTATCTTCGAGAAGCCATTGTTGAATATTACATTTGCAGATCTCTTATCTGCAACTTCAAATTTTGATAGGGGTACCCTTTTGGCTGAAGGAAAATTTGGACCTGTTTATAGAGGCTTTCTGCCTGGAAATATTCATGTAGCAGTTAAAGTGTTGGTTGTGGGTTCTACATTGACAGATGAAGAAGCTGCAAGAGAACTTGAGTTTCTTGGTAGAATCAAACATCCTAATCTTGTTCCTTTAACTGGTTATTGTGTAGCTGGTGATCAAAGGATTGCTATATATGATTACATGGAGAATGGTAACTTGCAAAATCTTCTTTATGATTTGCCACTTGGTGTTCAAAGCACAGATGATTGGAGCACAGACACATGGGAAGAAGCTGATAATGGAATTCAAAATGTTGGTTCTGAAGGATTGCTCACAACCTGGAGATTTCGACACAAAATCGCGCTTGGAACTGCAAGAGCATTGGCATTTCTGCATCATGGATGTTCTCCTCCAATAATTCATAGAGCTGTTAAAGCTAGCAGTGTTTATTTGGACTATGATTTGGAGCCAAGGTTGGCTGATTTTGGTCTTGCCAAGATTTTTGGAAGTGGTTTGGATGAAGAGATTGCACGCGGTTCGCCCGGTTATGTTCCACCGGAGTTTTCTCAACCGGAATTCGAGTCTCCAACGCCGAAATCTGATGTATATTGTTTTGGTGTTGTTCTTTTTGAGCTACTAACTGGAAAGAAGCCGGTTGGAGATGATTACACTGATGATAAAGAAGCAACGACTTTGGTAAGTTTGGTTAGAGGACTTGTAAGGAAGAATCAAACTTCAAGAGCTATTGATCCGAAAATTCGCGATACGGGATTAGATGAACAAATGGAGGAGGCTCTTAAAGTTGGATATCTATGCACAGCTGATTTACCTTTCAAGAGACCAACCATGCAGCAGATAGTTGGACTTCTAAAGGATATTGAACCTGCAACTAGTTAG 2556 0.3768 MGLGVFGSVLVLTFLFKHLASQQPNTDEFYVSEFLKKMGLTSSSKVYNFSSSVCSWKGVLCDANNEHVVELNFSGIGLTGPIPDTTIGKLNKLQSLDLSKNKITSLPSDFWSLTSLKSLNLSSNQISGSLTNNIGNFGSLENFDLSKNSFADEIPEALSSLVSLKVLKLEHNMFVKSIPSGILKCQSLVSIDLSSNQLDGTLPHGFGDALPKLRTLNLAENNIYGGVSDFSGLKSIVSLNISGNSFQGSIIDVFVLKLEVLDLSRNQFQGHISEVKYNWSHLVYLDLSENQLSGEIFQNLNNSMNLKHLSLACNRFTRQKFPKIEMLLGLEYLNLSKTSLVGHIPDEISQLGNLNALDLSMNHLDGKIPLLKNKHLQVIDFSHNNLSGPVPSSVLKNLPKMKKYNFSYNNLTLCASEIKPDIMKTSFFGSVNSCPIAANPSFFKKRKDAGHRGMKLALILALSLIFALAGILFLAFGCRRKHKMWEVKQGSYREEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGNIHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWEEADNGIQNVGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLADFGLAKIFGSGLDEEIARGSPGYVPPEFSQPEFESPTPKSDVYCFGVVLFELLTGKKPVGDDYTDDKEATTLVSLVRGLVRKNQTSRAIDPKIRDTGLDEQMEEALKVGYLCTADLPFKRPTMQQIVGLLKDIEPATS* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5418 851 ProSiteProfiles Leucine-rich repeat profile. 92 113 IPR001611 GO:0005515
Mal5g5418 851 SMART LRR_sd22_2 113 145 - -
Mal5g5418 851 SMART LRR_sd22_2 90 108 - -
Mal5g5418 851 SMART LRR_sd22_2 279 302 - -
Mal5g5418 851 SMART LRR_sd22_2 373 400 - -
Mal5g5418 851 Gene3D Ribonuclease Inhibitor 322 436 IPR032675 -
Mal5g5418 851 Gene3D Ribonuclease Inhibitor 31 179 IPR032675 -
Mal5g5418 851 Gene3D Ribonuclease Inhibitor 180 255 IPR032675 -
Mal5g5418 851 Gene3D Ribonuclease Inhibitor 256 321 IPR032675 -
Mal5g5418 851 Pfam Leucine Rich repeat 280 295 IPR001611 GO:0005515
Mal5g5418 851 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 848 - -
Mal5g5418 851 SMART LRR_typ_2 90 112 IPR003591 -
Mal5g5418 851 SMART LRR_typ_2 327 351 IPR003591 -
Mal5g5418 851 SMART LRR_typ_2 113 137 IPR003591 -
Mal5g5418 851 SMART LRR_typ_2 161 185 IPR003591 -
Mal5g5418 851 SMART LRR_typ_2 210 232 IPR003591 -
Mal5g5418 851 Gene3D Transferase(Phosphotransferase) domain 1 621 850 - -
Mal5g5418 851 Pfam Protein kinase domain 549 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5418 851 Gene3D Phosphorylase Kinase; domain 1 505 620 - -
Mal5g5418 851 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 848 - -
Mal5g5418 851 SUPERFAMILY L domain-like 42 415 - -
Mal5g5418 851 PRINTS Leucine-rich repeat signature 113 126 - -
Mal5g5418 851 PRINTS Leucine-rich repeat signature 93 106 - -
Mal5g5418 851 SUPERFAMILY Protein kinase-like (PK-like) 522 843 IPR011009 -
Mal5g5418 851 Pfam Leucine rich repeat 82 126 IPR001611 GO:0005515
Mal5g5418 851 Pfam Leucine rich repeat 187 245 IPR001611 GO:0005515
Mal5g5418 851 ProSiteProfiles Protein kinase domain profile. 545 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5418 Mal-Chr5 128809831 128812386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5418 54 846 Receptor kinase-like Gene Family AT5G07280 32.701 3.40e-110 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mal5g5418 Pkinase 7.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5418 - - gmx:100787157 1382.08