Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5416 ATGGCCTCCGAACCTCTCCCAGTGGGACCCACTAAGCGAAATCATTCAGACGGAAACCATGAACAGAAAATTCAAGAGATAAAGGAACCTCTCCCAGTCGCTGAATCACCACCCGCCGCCGAGTCCAAGCAAGGTGAATTAGCGACTTCTAATGAACACGAAACCCTAATTTCTTTTCCATCTTCAATTTTGGATCAACGGACTTTCGATGTGCAGGGGAGCCCTAGTACGCTGAATTCGGGTGCCCAATCCGAAATTAAGGAAACAGTAGGACCTCCTGAACAGGAAGTTACCACAACAGAAGCATCCCAGAAAACTCCAACTCAGGTTGAAAATCAGCTTCAAGTGACTGTGTCTTCAGCTCCAATGTCTGAACTATCGCCAAATTCTGTTACAAAATCTATATCATCTGCTCCTAGTTCGACCATACAAATACAAAAAATGTCTCCTACAAACGTTTGTAACACACCTGTGCCAGAAGTAAACAAAAAAAATCCTTCTGGTGGTAAAGCCTTATCCTCTGTTTCTGTTCCAAGGACACCGGCATCTGATGGATACAACTGGCGGAAATATGGTCAGAAGCAAGTTAAGAGTCCTACTACAGGTTCTCGAAGCTATTACAGGTGCACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAAAAGTGACCACAGTCATGATCCCCCGCGGAAGACTAACTCCATTAGGGAAAGTAAGTTTGCATCTCCCAAAGAACCTACTGCAGAGAACAGTGTTTTAGTGAAGCCTGTCAATGTTCCGAAGGATTCTGATCCATCCACATCTTCCAATGCTCAAGAAGAAGCACCTTGCAGTACTGACGAGAAACCACAAAACTCATCTAATATAAATGGTAATGGTAAAGTTATTTTGAAGGAGGAACATCTAGACGAACCAGAGGCAAAACGAAGAAAGGAGAAAGGCGACTTAATTCACTCAGATTCTCCTGTAAAACCTGAAAAGAAACCCAAGTTTGTTGTACATGCAGCAGGAGATGTGGGTATATCAGGTGATGGATACCGATGGCGAAAGTATGGACAGAAAATGGTGAAGGGTAACCCACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGGAAGCACATTGAGACTGCCGTTGACAACTCGGATGCTGTCATTATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCGAAGAAACGACATGGACCACCTAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAATAATTTGCCGTTGAATAATTCGGGCGGTAAACCGGGCTCGCCACAAAGCCAGAAAATTTCTACTCAATGGTCAGTAGGCACAGAAGGAGAACTAACTGGGGAAACCATGGACCTTGGGGGTGAGAAAGCAATAGAGTCAGCTCGGACACTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1497 0.4476 MASEPLPVGPTKRNHSDGNHEQKIQEIKEPLPVAESPPAAESKQGELATSNEHETLISFPSSILDQRTFDVQGSPSTLNSGAQSEIKETVGPPEQEVTTTEASQKTPTQVENQLQVTVSSAPMSELSPNSVTKSISSAPSSTIQIQKMSPTNVCNTPVPEVNKKNPSGGKALSSVSVPRTPASDGYNWRKYGQKQVKSPTTGSRSYYRCTQSNCCAKKIECWDHSGHVIETVYKSDHSHDPPRKTNSIRESKFASPKEPTAENSVLVKPVNVPKDSDPSTSSNAQEEAPCSTDEKPQNSSNINGNGKVILKEEHLDEPEAKRRKEKGDLIHSDSPVKPEKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPASMNNLPLNNSGGKPGSPQSQKISTQWSVGTEGELTGETMDLGGEKAIESARTLLSIGFEIKPC* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5416 498 MobiDBLite consensus disorder prediction 440 462 - -
Mal5g5416 498 MobiDBLite consensus disorder prediction 233 251 - -
Mal5g5416 498 MobiDBLite consensus disorder prediction 1 178 - -
Mal5g5416 498 MobiDBLite consensus disorder prediction 43 86 - -
Mal5g5416 498 Pfam WRKY DNA -binding domain 357 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 Pfam WRKY DNA -binding domain 184 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 SMART WRKY_cls 355 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 SMART WRKY_cls 182 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 MobiDBLite consensus disorder prediction 233 341 - -
Mal5g5416 498 ProSiteProfiles WRKY domain profile. 183 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 MobiDBLite consensus disorder prediction 309 341 - -
Mal5g5416 498 ProSiteProfiles WRKY domain profile. 350 415 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 39 496 IPR044810 GO:0003700
Mal5g5416 498 SUPERFAMILY WRKY DNA-binding domain 351 415 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 SUPERFAMILY WRKY DNA-binding domain 178 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 39 496 - -
Mal5g5416 498 MobiDBLite consensus disorder prediction 14 28 - -
Mal5g5416 498 Gene3D WRKY domain 341 416 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 Gene3D WRKY domain 169 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g5416 498 MobiDBLite consensus disorder prediction 93 178 - -
Mal5g5416 498 MobiDBLite consensus disorder prediction 274 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5416 Mal-Chr5 128791715 128796968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5416 109 498 WRKY Transcription Factor Family AT4G30935 54.198 1.42e-125 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal5g5416 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5416 - - gmx:100127377 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5416 5 128791715 128796968 Mal5g5416 5 128791715 128796968 ECH