Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5402 ATGTTTTTAGATCATAATCACTTTCTAACCCAAGATTGTGGTGGAAGTCATATTCAAAATACAGTCACTGTTGACCAACAACCGGGAAAAGGTAATTTTGTAACAGTGAAAGCTGCCATTAAGTCTATACAAGAAAATAACAATCAATGGTTTAAAATTCACATAAATCCAGGCGTCTATTGGGAAAAGATTTATATACCCATTTCAAAACCATGCATCATTTTAGAAGGATCAGGTAGTAATACTACAACTTTTAAAACTGGTTATCATGAAAGAACATCAAGATGGGATTCTACATTCAGTTCATACCCAACTAATGTGATTGTGAGTGGCATTACATTCGAGAACACATATAATTTGGAAGGAAGGTCAAAATTTATCAAACAAGCAGTGGCAGCTGCTTTCTACGGAGACAAATCTGCAATCTTTAATTGTAGATTTTTGAGTTATCAAGATACTTTGTTTGCAGCGTTAGGACGACATTACTTTAAAGATTGTTATATTCAAGGTGAAATCGACTTTATTTTTGGTTCTGGCCAATCTTATTTTGAGAATTGTATGATGAATGCCACACTGAGGAACTCGCAAAATCCAGGTTTTGTGACTGCTCAACGTAGGGATAAATCAACTGATACAAATGGTTTTGTTTTTAGACAAGGGTCTGTAGTTGGAAATGGTGAAGTGGCTCTAGGAAGACCTTGGGGTCCATATTCAAGAGTTATATTTTGGGAAACATTTTTTTCACAAGTGGTAACTCCACAAGGATGGAATGCTTGGCAAACTCAAGTAAATCAGCTCACATATGGAGAAATCAATTGCACAGGACCAGGGGCCAATAATAAGGCACGTGTCCCTTGGATAAAAAAAAGCCTGAATAACTTCGAAGTAAATGAATATTCTTTATCATCTTTCATAAATAACGACGGATGGCTTAGTAAAATACCACCTCTATCCTTGTAA 960 0.3563 MFLDHNHFLTQDCGGSHIQNTVTVDQQPGKGNFVTVKAAIKSIQENNNQWFKIHINPGVYWEKIYIPISKPCIILEGSGSNTTTFKTGYHERTSRWDSTFSSYPTNVIVSGITFENTYNLEGRSKFIKQAVAAAFYGDKSAIFNCRFLSYQDTLFAALGRHYFKDCYIQGEIDFIFGSGQSYFENCMMNATLRNSQNPGFVTAQRRDKSTDTNGFVFRQGSVVGNGEVALGRPWGPYSRVIFWETFFSQVVTPQGWNAWQTQVNQLTYGEINCTGPGANNKARVPWIKKSLNNFEVNEYSLSSFINNDGWLSKIPPLSL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5402 319 SUPERFAMILY Pectin lyase-like 17 313 IPR011050 -
Mal5g5402 319 Pfam Pectinesterase 27 307 IPR000070 GO:0030599|GO:0042545
Mal5g5402 319 Gene3D - 15 315 IPR012334 -
Mal5g5402 319 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 316 - -
Mal5g5402 319 PANTHER PECTINESTERASE 10 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5402 Mal-Chr5 128660295 128665361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5402 12 262 Carbohydrate Esterase AT2G19150 44.531 1.47e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5402 - - gmx:100803932 356.681