Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5401 ATGAACATGGCTTCTTCTTCTTCTTCTCCACTATTGTTGATGATCATTTTCTCAATGTCTCTGCTAATTTCATGCTCAGAATCCACAGAATATCTGCTTGGAGACAGTCACAATTCATGGAAGGTTCCTCTTCCTTCACGACGTGCACTTGCCCACTGGGCCTCTGCTTACGAATTCACAGTCGGCGATACTATCCGGTTTGAGTACGATAATGAAACAGAATCAGTGCACGAAGTAGATGAGCATGACTATATAATGTGTCATACAAATGGAGAACAACATGTGGAGCACCACGACGGCAATACTACGGTTGTGCTTGATAAAATAGGAGTATATCATTTCATAAGTGGAACAAAACGTCATTGCAAGATGGGTTTAAAGCTAGCTGTGATTGTCAAAAACAAGCATGACCTTGTTCTTCCACCTCTAATTACCATGCCTATGCCACCTTCGCCGTCACCGTCGCCAAATTCGTCCGGTAATAAAGGTGGTGGTGGTGCTGGCCTTGGATTCATCATGTGGTTGGGAGTTAATTCATTGGTGATGATGATCTTCTTAATTTAA 564 0.4255 MNMASSSSSPLLLMIIFSMSLLISCSESTEYLLGDSHNSWKVPLPSRRALAHWASAYEFTVGDTIRFEYDNETESVHEVDEHDYIMCHTNGEQHVEHHDGNTTVVLDKIGVYHFISGTKRHCKMGLKLAVIVKNKHDLVLPPLITMPMPPSPSPSPNSSGNKGGGGAGLGFIMWLGVNSLVMMIFLI* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5401 187 CDD Phytocyanin 29 132 - -
Mal5g5401 187 Pfam Plastocyanin-like domain 40 125 IPR003245 GO:0009055
Mal5g5401 187 ProSiteProfiles Phytocyanin domain profile. 29 134 IPR003245 GO:0009055
Mal5g5401 187 SUPERFAMILY Cupredoxins 27 133 IPR008972 -
Mal5g5401 187 Gene3D - 28 137 IPR008972 -
Mal5g5401 187 PANTHER BLUE COPPER PROTEIN 15 186 IPR039391 GO:0009055
Mal5g5401 187 PANTHER EARLY NODULIN-55-2 15 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5401 Mal-Chr5 128656347 128657097 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5401 7 177 Phytocyanin Superfamily AT4G31840 32.558 2.71e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5401 - - mtr:MTR_4g130800 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5401 5 128656347 128657097 Mal5g5401 5 128656347 128657097 ECH