Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5393 ATGCCTTCACGTTGTGAAATTTGCTGTGAGATTATGATCGCTGTCTTGCTCCCTCCATTGGGTGTTTGTCTTCGCCATGGTTGCTGCACTGTTGAATTCATCATCTGCTTGCTCCTTACTATACTAGGGTATATTCCTGGTATAATCTATGCTCTTTATGCCATTATCTTTGTTGATCGTGATCAGTACTTTGATGAATCTAGGCGTCCTTTGTATGCAAACCAATACTAA 231 0.4069 MPSRCEICCEIMIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDESRRPLYANQY* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5393 76 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016021
Mal5g5393 76 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 73 IPR000612 GO:0016021
Mal5g5393 76 PANTHER BNAA03G50460D PROTEIN 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5393 Mal-Chr5 128551781 128552285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5393 1 75 RCI2 Gene Family AT4G28088 77.333 1.38e-40 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5393 - - lja:Lj0g3v0097159.1 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5393 5 128551781 128552285 Mal5g5393 5 128551781 128552285 ECH