Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5388 ATGCAGCAAGGTGATCAAACTGTTCTTAGCTTGAGGCCTGGTGGTGGTCGAGGAAACAGGCTTCTCGCTCCAAGATTCGATTCTTCCTCATCCAATTCATCCTTTTCACCTGATCTTTCTATCCTCCGTCCCAATGCTGCAGCTTCTTCTCTCCTCGCTTTCAAGGTTGGAGATTCACATTTTGAGAGCCGTGAGCGTGTGCGATATACCAAAGAAGAGCTTTTACAGATTAGAGAGACTGTTGAGGAGACCCCTGGTGATATTTTAAAGCTCAGACATGATATTGATGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGTCGTGTAGAAAGCAATCCCCCAATTCAAAATCAAAATCGATATTCTGAACCAGATAACCGTGACTGGCGTGGCCGATCTGCTCAACCTCCGGCTAACACAGATGAGAGGTCTTGGGATAATATCAAGGAGAATAGAGAATTTGGCAATGCTAATCAGGTTAATCGTCAAGACCAACCGATCGGACGTTCTAACCAAGGGGGAGGACCTGCTCCTACTCTAGTCAAGGCTGAGGTACCATGGTCTGCTAGAAGGGGAACTCTCTCCGACAAGGATCGTGTCCTAAAGACTGTTAAAGGAATACTAAACAAGCTGACTCCTGAAAAATTTGACCTCCTGAAGGGTCAGTTGATCGATTCTGGCATTACATCAGCTGACATATTGAAGGGAGTCATTTCACTGATATTTGATAAGGCAGTCCTAGAACCAACATTCTGCCCAATGTATGCTCAGCTGTGTTCTGATCTTAATGTAAATCTGCCTCCATTCGCATCTGAAGAACCTAATGGGAAAGAGATAACTTTTAAGAGAGCACTCTTGAATAACTGCCAGGAAGCTTTTGAAGGCGCTGGTAAACTGAGGGAAGAATTGGCTCAGATGACTTCCCCTGAGCAGGAGACGGAGCGACGTGACAAGGAAAGACTTGTCAAGATTCGTACCCTTGGAAACATCCGTTTAATTGGTGAGCTGCTGAAGCAAAAAATGGTTACTGAAAGGATTGTCCATCACATTGTTCAGGAACTTTTAGGACCTTCTGACAGCAATGTCTGTCCGGCTGAGGAAAATGTTGAAGCCATATGTCATTTTTTCAACACTATTGGGAAGCAGCTTGATGAAAGCCCAAAATCACGACGTATAAATGATATGTACTTCGGCAGGTTGAAAGAATTGAGCACCAATCCCCAACTTGCACCACGGATGAAATTCATGGTTCGTGATGTCATAGATTTGCGTGCTAGTAACTGGGTTCCAAGACGTGAAGAGGTTAAGGCCAAAACCATCTCTGAAATCCATGATGAGGCAGAAAAGAATCTTGGATTGCGTCCAGGTGCCACTGCAATTATGAGAAACACCCGTGTTACTGGTGTTCAAGGAAATACCGGAGCTGGGGGCTATCCCATTGCCCGACCTGGTACAGGAGGTTTAATGCCTGGGATGCCGGGTGCCAGGAAGATGCCTGGGATGCCTGGTATTGATAATGATAACTGGGAGGTGCCTAGGACTAGATCTATGCCAAGAGGAGACATGTCTGGCATGCAAGCTGGAGGACGTGGGCAGTCTCCTTTCCTTTCCAAGCCATCAGCCATAAACTCGAAGTTACTGCCTCAAGGTAGTAGTGGTCTTATAAGTGGGAAGAATAGTGCCCTGGTGCTTGGAGGTGGTACTCCTTCTGCTCGTCCATTAAACATTGTTTCAGGTACCGAGCCTGCACCTCAAATCCCTTCACCTGTTAAACCTGTTTCTGCTGTATCCCCTGAGAAGCCACAGGCCCCAGCTGTAAAATTGAATATTGATGATCTTCACCGCAAAACTGTTTCTCTTCTGGAAGAATATTTCAATGTTCGGCTTTTGGACGAGGCATTGCAGTGTGTGGAGGAACTAAAAGCTCCGACTTATCACCCAGAGCTTGTCAAGGAAGCCATTTCCCTTGGACTAGATAAAAGTCCACCATGTGTTGAACCTGTTGCCAATCTTATCGAGTATCTCTTGATCAAGAAGATTCTCTCAGCTAGAGACATAGGGACTGGCTGTTTGTTATTTGCTTCTCTGCTTGATGATATTGGCATAGATTTACCTAAAGCACCAAATAACTTTGGTGAGATAATAGGGAAACTAGTTTTGGCTGGGGGTTTGGACTTCAAGGTGGTGAGAGAGATTCTTAGGAAGGTGGGGGACGACTACTTCCAGAAAGCAATATTCAACTCTGCAGTGCAGGTAATTAGCTCTGCATCCGGGCAAGCTGTGTTGGATTCACAGGCATCTGATATTGAGGCCTGCGAGGCTCTGTTCGAGTGA 2334 0.4572 MQQGDQTVLSLRPGGGRGNRLLAPRFDSSSSNSSFSPDLSILRPNAAASSLLAFKVGDSHFESRERVRYTKEELLQIRETVEETPGDILKLRHDIDAELFGEDQSWGRVESNPPIQNQNRYSEPDNRDWRGRSAQPPANTDERSWDNIKENREFGNANQVNRQDQPIGRSNQGGGPAPTLVKAEVPWSARRGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNVNLPPFASEEPNGKEITFKRALLNNCQEAFEGAGKLREELAQMTSPEQETERRDKERLVKIRTLGNIRLIGELLKQKMVTERIVHHIVQELLGPSDSNVCPAEENVEAICHFFNTIGKQLDESPKSRRINDMYFGRLKELSTNPQLAPRMKFMVRDVIDLRASNWVPRREEVKAKTISEIHDEAEKNLGLRPGATAIMRNTRVTGVQGNTGAGGYPIARPGTGGLMPGMPGARKMPGMPGIDNDNWEVPRTRSMPRGDMSGMQAGGRGQSPFLSKPSAINSKLLPQGSSGLISGKNSALVLGGGTPSARPLNIVSGTEPAPQIPSPVKPVSAVSPEKPQAPAVKLNIDDLHRKTVSLLEEYFNVRLLDEALQCVEELKAPTYHPELVKEAISLGLDKSPPCVEPVANLIEYLLIKKILSARDIGTGCLLFASLLDDIGIDLPKAPNNFGEIIGKLVLAGGLDFKVVREILRKVGDDYFQKAIFNSAVQVISSASGQAVLDSQASDIEACEALFE* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5388 777 MobiDBLite consensus disorder prediction 104 179 - -
Mal5g5388 777 Pfam MIF4G domain 201 427 IPR003890 GO:0003723|GO:0005515
Mal5g5388 777 Gene3D - 201 440 - -
Mal5g5388 777 SMART if4_15 201 427 IPR003890 GO:0003723|GO:0005515
Mal5g5388 777 ProSiteProfiles MI domain profile. 612 734 IPR003891 -
Mal5g5388 777 SMART ma3_7 613 725 IPR003891 -
Mal5g5388 777 MobiDBLite consensus disorder prediction 151 172 - -
Mal5g5388 777 Pfam MA3 domain 614 725 IPR003891 -
Mal5g5388 777 SUPERFAMILY ARM repeat 195 430 IPR016024 -
Mal5g5388 777 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 776 - -
Mal5g5388 777 MobiDBLite consensus disorder prediction 1 36 - -
Mal5g5388 777 SUPERFAMILY ARM repeat 608 763 IPR016024 -
Mal5g5388 777 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 776 IPR045208 GO:0003743
Mal5g5388 777 Gene3D - 606 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5388 Mal-Chr5 128476510 128481877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5388 1 775 Eukaryotic Initiation Factors Gene Family AT5G57870 63.832 0.0 954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5388 5 128476510 128481877 Mal5g5388 5 128476510 128481877 ECH