Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5385 ATGGAAGCCAGCGCCGGATTAGTCGCTGGTTCTCACAACCGTAACGAGCTTGTTGTCATTCATGGCCATGAAGAGCATAAGCCTTTGAAGAACTTGGATGGTCAAGTGTGTGAGATTTGTGGTGATGATGTTGGACTCACTGTGGATGGAGACTTGTTTGTTGCATGTAATGAGTGCGGTTTTCCGGTGTGCCGGCCATGCTATGAATATGAAAGAAGGGAGGGGAGACAACTGTGTCCTCAGTGCAAGACCAGATACAAGCGTCTCAAAGGGAGCCCTCGGGTTGAGGGAGACGATGATGAGGAGGATGTCGACGATATTGAACATGAATTTAACATTGAAGACAAAATGAACAATCATGATCATTCTGCTGAGGCCATGCTGCATGGGAAGATGAGCTATGGAAGAGGTCCTGAAGATGATGAGAATGCACACTTCCCAGCTGTTATTGCTGGCGGTCGCTCTCGGAATGTGAGTGGTGAGTTCCCAATATCATCTCATAGTTATGGGGAGCAGATGTTATCTTCGCTGCATAAAAGAGTGCATCCATATTCCGCTTCTGATCCTCGAAGTGCAGGATGGGATGAAAAGAGAGAAGATGGATCATATGATAGAATGGATGACTGGAAATTGCAGCAAGGAAATTTGGGACCTGAACCTGATGAAGATCAAGATGCAGACATGTCAGATGAAGCAAGGCAGCCACTGTCAAGGAAGGTACCAATAGCATCTAGCAAAATCAATCCATATAGGATGGTGATTGTGGCACGGCTTGTTATTCTTGGCTTCTTCCTCCGATACAGACTTATGAACCCAGTACATGATGCAATGGGGCTATGGCTAACTTCTATTATATGTGAAATCTGGTTTGCTTTTTCATGGATCCTTGATCAGTTTCCCAAATGGTATCCTATTGATAGAGAAACATACCTTGACCGCCTTTCAATCAGGTATGAGCGTGAAGGCGAACCCAATATGCTTGCTCCTGTAGATGTGTTTGTCAGTACTGTGGATCCTTTGAAGGAACCTCCTCTGAATACAGCAAACACGGTTCTTTCAATCTTAGCAATGGACTACCCAATTGATAAAATATCATGCTACATTTCTGATGATGGAGCTTCAATGTGTACATTTGAAGCCCTGTCGGAAACGGCAGAGTTTGCTAGGAAGTGGGTACCGTTCTGTAAGAAATTTTTGATAGAACCTCGCGCACCAGAGATGTACTTTTCTGAGAAAATTGACTATCTAAAGGACAAGGTGCAGCCCACTTTTGTCAAAGAACGTCGATCCATGAAGAGAGAATATGAAGAGTTCAAGGTTAGGATCAATGCACTTGTGGCAAAAGCCCAGAAAGTTCCTCCAGGAGGATGGATTATGCAGGATGGGACACCATGGCCAGGAAACAATACTAAGGATCATCCCGGTATGATTCAAGTCTTTCTTGGTCACAGTGGAGGTCATGATAGTGAAGGAAACCAGCTTCCTCGCCTTGTTTATGTATCCAGAGAGAAAAGGCCTGGATTTCAACACCACAAGAAAGCTGGTGCCATGAATGCTCTGGTTCGGGTCTCTGCAGTGCTTACAAATGCTCCTTTCATGCTGAACTTGGATTGTGATCATTATATCAATAACAGCAAGGCTGTCCGAGAGGCCATGTGCTTCTTGATGGATCCCCAAACAGGGAAGAAGGTCTGCTATGTCCAGTTTCCTCAAAGATTTGATGGCATTGATACACATGATCGATATGCCAATAGGAACACAGTTTTCTTTGATATTAACATGAAGGGTTTAGATGGTATTCAGGGTCCTGTATATGTCGGCACAGGGTGTGTATTTAGAAGGCAAGCTTTATATGGATATAGTCCTCCCAAAGGTCCCAAGCGTCCAAAAATGGTAAGTTGTGATTGCTGCCCATGTTTTGGAAGGCGCAAGAAGGTTAAGCATGCAATGAACGACACAAATGGAGAAGCTGCAGGCCTAAGAGGAATGGATGACGACAAAGAATTACTGATGTCCCAGATGAATTTTGAGAAGAAATTTGGGCAGTCATCAATTTTTGTGACTTCAGTCTTGATGGAAGAGGGTGGTGTACCTCCTTCGTCAAGTCCAGCAAGCCAGCTTAAAGAAGCCATTCATGTAATCAGCTGCGGATATGAAGATAAAACTGAATGGGGGATTGAGCTTGGTTGGATTTATGGGTCTATTACAGAGGATATTCTAACAGGCTTTAAGATGCATTGCCGTGGTTGGAGATCCATTTACTGTATGCCAAAGAGAGTAGCATTCAAGGGTACTGCTCCTATCAACTTGTCAGATAGACTCAACCAGGTGCTTCGTTGGGCTCTTGGCTCCATTGAGATCTTTTTCAGTCATCATTGCCCTTTATGGTATGGCCACAAGGAAGGGAAGCTGAAGTGGCTGGAGCGGTTTGCCTATGCAAACACAACCGTCTACCCCTTCACCTCCATACCTCTAGTTGCCTACTGTATTCTTCCTGCTGTCTGTTTACTCACTGACAAATTCATCATGCCACCGATAAGCACTTTTGCTAGTTTGTACTTTGTTGCCCTCTTCTCTTCAATCATTGCAACGGGCATTCTTGAGTTGAAATGGAGTGGAGTCAGCATTGAGGAATGGTGGAGAAATGAGCAATTCTGGGTCATTGGTGGTGTATCAGCACATCTCTTTGCTGTCATACAAGGTCTTCTGAAGGTTCTTGCTGGAATTGACACCAACTTCACTGTTACATCCAAGGCAACAGATGATGAGGAATTTGGAGAATTATACGCCTTTAAGTGGACTACTCTTCTAATTCCTCCAACCACTATCTTAATAATCAATATTGTTGGGGTTGTTGCTGGAATCTCAGATGCCATAAACAATGGTTACCAATCATGGGGACCTCTATTTGGAAAACTCTTCTTTTCTTTCTGGGTGATTGTCCATCTGTATCCATTCCTTAAAGGTTTGATGGGTCGGCAAAACCGCACACCCACCATTGTTGTGATATGGTCAGTGTTGTTGGCTTCCATTTTCTCCTTACTATGGGTAAGAATAGACCCATTCGTGCTCAAAACTAAGGGACCTGATACCAAGCTATGTGGAATCAACTGTTAA 3117 0.4402 MEASAGLVAGSHNRNELVVIHGHEEHKPLKNLDGQVCEICGDDVGLTVDGDLFVACNECGFPVCRPCYEYERREGRQLCPQCKTRYKRLKGSPRVEGDDDEEDVDDIEHEFNIEDKMNNHDHSAEAMLHGKMSYGRGPEDDENAHFPAVIAGGRSRNVSGEFPISSHSYGEQMLSSLHKRVHPYSASDPRSAGWDEKREDGSYDRMDDWKLQQGNLGPEPDEDQDADMSDEARQPLSRKVPIASSKINPYRMVIVARLVILGFFLRYRLMNPVHDAMGLWLTSIICEIWFAFSWILDQFPKWYPIDRETYLDRLSIRYEREGEPNMLAPVDVFVSTVDPLKEPPLNTANTVLSILAMDYPIDKISCYISDDGASMCTFEALSETAEFARKWVPFCKKFLIEPRAPEMYFSEKIDYLKDKVQPTFVKERRSMKREYEEFKVRINALVAKAQKVPPGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGHDSEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYSPPKGPKRPKMVSCDCCPCFGRRKKVKHAMNDTNGEAAGLRGMDDDKELLMSQMNFEKKFGQSSIFVTSVLMEEGGVPPSSSPASQLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRVAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGHKEGKLKWLERFAYANTTVYPFTSIPLVAYCILPAVCLLTDKFIMPPISTFASLYFVALFSSIIATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5385 1038 Pfam Cellulose synthase 330 1032 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mal5g5385 1038 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 477 621 IPR029044 -
Mal5g5385 1038 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1038 - -
Mal5g5385 1038 SUPERFAMILY Nucleotide-diphospho-sugar transferases 344 812 IPR029044 -
Mal5g5385 1038 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Mal5g5385 1038 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Mal5g5385 1038 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 1 1038 - -
Mal5g5385 1038 SUPERFAMILY RING/U-box 21 109 - -
Mal5g5385 1038 MobiDBLite consensus disorder prediction 191 207 - -
Mal5g5385 1038 MobiDBLite consensus disorder prediction 181 235 - -
Mal5g5385 1038 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Mal5g5385 1038 Coils Coil 428 448 - -
Mal5g5385 1038 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5385 Mal-Chr5 128435759 128440495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5385 1 1038 Cell Wall Biosynthesis AT5G17420 85.563 0.0 1830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5385 K10999 - gmx:100779834 2008.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5385 5 128435759 128440495 Mal5g5385 5 128435759 128440495 ECH