Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5380 ATGATGTGGTTTTTTAAACAACTCACAATGTTTCTATTCTATTTTCTTGTCATTGTTCATTCAAGACTTCATGAAAAGGAACATATTGATGTTGGCCTTATGAATGATCAAAATTCACTTGTTTCATTCATGTCACACATTATTTCGGACCCCAAAAACGCGCTAGGGAGTTGGAAATCAAACGCTGTTCATGTTTGTGATTGGTCAGGTGTCAAATGCAACAATGCAAGTAATAATAAAAGGATCATAGAGCTTGATCTAAGTGAAAAATCACTAGGAGGAACTATTTCCCCTGCTCTTGGTAACCTCTCTTTGTTGCAAATTCTTGACCTTTCTGGAAATCTTTTGGTGGGTCACATTCCAAGAGAATTAGGCTATTTAGTTCACCTTGAACAACTTAGTTTATCTTGGAATTTTCTTCAAGGGAACATTCCTTTAGAATTTGGTTCACTTCACAAATTGTATTACCTTGACTTGGGAAGCAATCAACTTGAGGGAGAGATTCCTCCACCACTTTTATGTAATGGAACTTCATTGAGTTATATAGACCTCTCTAATAATTCATTAGTGGGACAAATTCCATTAAACATTAATAAGTGTATACTTAAAGAGCTTAAGTTCCTCTTACTTTGGTCTAACAAACTTGTAGGACAAGTTCCTTTGGCTCTTTCAAACTCTACAAAGCTTAAATGGCTTGATTTGGAGTCAAATATGTTAAGTGGAGAGCTTCCATCTAAGATTATATGTAATTTTCCACAATTACAATTCCTCTACTTATCATATAACAATTTTGTTAGCCATGATGGTAACACTAACCTTGAACCTTTCTTTGCTTCTTTGATGAATGCATCTAACTTTCAAGAACTCGAATTGGCTGGAAACGATCTTGGCGGAAAGCTGCCTCATATTATAGGTAATCTTCCTACCAGCCTTCAACATTTTCACCTAGAAGAAAATCTCATACATGGCTCTATACCACCTCACATTGCCCACCTTGTCAACTTAACTTTCTTAAAGTTGTCTAGTAACCGAATAAAGGGAACAATACCTCGCAGCCTATGCAAGATTAATAGGCTAGAGAGAATTTATTTGTCGAACAATTATCTATCTGGTGAGATTCCTTCAACTCTCGGCGACATCCAACATCTTGGACTACTTGATTTGTCAAAAAACAAGCTTTCTGGTTTGATACCGGATAGCTTTGCAAAACTCCCTCAATTAAGAAGGCTTTTACTTTATGAAAACCACCTTTCTGGGACAATCCCACCAAGTCTTGGAAAATGTGTCAATTTAGAGATTTTAGACTTGTCCCACAACAAGATCACAGGTCTAATTCCTGCAGAAGTTGCAGCATTGTCTAGCTTGAAACTATACTTGAATTTATCAAACAATGAGTTACAAGGCCCTTTACCATTAGAACTAAGCAAAATGGACATGGTACTAGCTATTGATCTATCTATGAATAATCTCTCTGGTAAAATTCCACCACAACTTGAAAATTGCATAGCATTAGAATATCTCAATCTTTCTAGTAATTCCTTAGAAGGTCCCTTACCTTATTCATTAGGACAATTGCCTTATATTCAATCACTTGATGTCTCTTCAAATCAATTGAATGGAACAATACCTGAGTCCCTTCAGTTGTGTTCCTACCTCAAAACACTTAACTTCTCTTTCAACAAATTCTCAGGAAATGTTTCAAACAAAGGAGCATTTTCATCTTTGACCATAGACTCTTTTCTAGGAAACAATGATCTATGTGGTTCATTTAATGGCATGAAGCAATGTCATAGGAAAAGCAGTTACCGTTTGGTGTTTTTGTTAGTTCCTGTGTTACTATTTGGCACACCTATGATATGCATGTGTAGGAACTCCATGATAATCAAATCAAAACTGAGAACGAAACTGCGAGTCAGTAGTAGCGGATGTGACTTGGAGGACGACGAAGATGAAACAAGAGAGCTCAAGTATCCAAGAATTTCATATAGACAAATTAGAGAAGCAACTGGTGGCTTCAATTCTTCAAACCTCATCGGTTCAGGTCAGTTCGGACAAGTTTACAAAGGTGTTCTCCTAGATAATACAAGAGTAGCAGTGAAAGTATTAGATTCAACAAAAGGTAATGAGATATCATGGAGCTTTAGAAGGGAATGCCAAATCCTTAGAAAGATAAGGCACAGAAATTTAATAAGGATCATTACAATTTGCAACAAGCAAGAATTTAAGGCTATTGTTCTTCCTATGATGTCAAATGGTAGTCTTGAGAGGATCCTATATGATACAAACCATGAGTTAAATCATAGGTTGGATGTGATTCAATTAGTGAGGATTTGTAGTGATGTAGCTGAGGGAATGTGTTATCTGCACCATTATTCTCCTGTGAAAGTAGTGCATTGTGATCTTAAGCCTAGCAATATACTACTTGATGATGACTTTACAGCTTTGGTCTCTGATTTTGGAATTTCAAGGCTTCTAAAAGGCGATGACAATACTTCCACATGTAACTCAACATCTTTCAGTTCAACTCATGGCTTGCTATGTGGATCTGTTGGTTATATAGCTCCTGAATATGGAATGGGAAAACAAGCTTCAACTGAGGGTGATGTTTACAGTTTTGGAGTGATTCTGTTAGAAATAGTGACAGGTAGACGCCCTACCGATGTCCTTATCCATGAAAGCTCTAGCTTGCATGATTGGGTTAAGAGACAGTACATACAGCCAAACAAACTTGGAAACATTGTTGAGCAAGCACTTCAAAGGTTCTCTCTTTCTTGTGTGTCAAGGAATGATAGCAAACTTTGGGAAGATGTTATGTTGGAACTTATTGAGCTGGGGATACTCTGCACACAGCAGAACCCTTCAACAAGACCAACCATGCTAGATGTAGCACAAGAGATGGGGAGATTGAAGGATTACCTCACTAATTCTTTTAGAGGAGAAGATAATTTAATTGAAAAGTAA 2961 0.3691 MMWFFKQLTMFLFYFLVIVHSRLHEKEHIDVGLMNDQNSLVSFMSHIISDPKNALGSWKSNAVHVCDWSGVKCNNASNNKRIIELDLSEKSLGGTISPALGNLSLLQILDLSGNLLVGHIPRELGYLVHLEQLSLSWNFLQGNIPLEFGSLHKLYYLDLGSNQLEGEIPPPLLCNGTSLSYIDLSNNSLVGQIPLNINKCILKELKFLLLWSNKLVGQVPLALSNSTKLKWLDLESNMLSGELPSKIICNFPQLQFLYLSYNNFVSHDGNTNLEPFFASLMNASNFQELELAGNDLGGKLPHIIGNLPTSLQHFHLEENLIHGSIPPHIAHLVNLTFLKLSSNRIKGTIPRSLCKINRLERIYLSNNYLSGEIPSTLGDIQHLGLLDLSKNKLSGLIPDSFAKLPQLRRLLLYENHLSGTIPPSLGKCVNLEILDLSHNKITGLIPAEVAALSSLKLYLNLSNNELQGPLPLELSKMDMVLAIDLSMNNLSGKIPPQLENCIALEYLNLSSNSLEGPLPYSLGQLPYIQSLDVSSNQLNGTIPESLQLCSYLKTLNFSFNKFSGNVSNKGAFSSLTIDSFLGNNDLCGSFNGMKQCHRKSSYRLVFLLVPVLLFGTPMICMCRNSMIIKSKLRTKLRVSSSGCDLEDDEDETRELKYPRISYRQIREATGGFNSSNLIGSGQFGQVYKGVLLDNTRVAVKVLDSTKGNEISWSFRRECQILRKIRHRNLIRIITICNKQEFKAIVLPMMSNGSLERILYDTNHELNHRLDVIQLVRICSDVAEGMCYLHHYSPVKVVHCDLKPSNILLDDDFTALVSDFGISRLLKGDDNTSTCNSTSFSSTHGLLCGSVGYIAPEYGMGKQASTEGDVYSFGVILLEIVTGRRPTDVLIHESSSLHDWVKRQYIQPNKLGNIVEQALQRFSLSCVSRNDSKLWEDVMLELIELGILCTQQNPSTRPTMLDVAQEMGRLKDYLTNSFRGEDNLIEK* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5380 986 Gene3D Ribonuclease Inhibitor 201 599 IPR032675 -
Mal5g5380 986 ProSiteProfiles Protein kinase domain profile. 672 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5380 986 Gene3D Ribonuclease Inhibitor 34 200 IPR032675 -
Mal5g5380 986 Pfam Protein kinase domain 673 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5380 986 Gene3D Transferase(Phosphotransferase) domain 1 749 982 - -
Mal5g5380 986 SMART serkin_6 672 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5380 986 SUPERFAMILY Protein kinase-like (PK-like) 654 964 IPR011009 -
Mal5g5380 986 SUPERFAMILY L domain-like 279 580 - -
Mal5g5380 986 ProSitePatterns Protein kinases ATP-binding region signature. 678 700 IPR017441 GO:0005524
Mal5g5380 986 Gene3D Phosphorylase Kinase; domain 1 644 747 - -
Mal5g5380 986 Pfam Leucine Rich Repeat 504 523 IPR001611 GO:0005515
Mal5g5380 986 Pfam Leucine Rich Repeat 430 448 IPR001611 GO:0005515
Mal5g5380 986 PANTHER OS04G0122200 PROTEIN 26 970 - -
Mal5g5380 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Mal5g5380 986 Pfam Leucine rich repeat 358 417 IPR001611 GO:0005515
Mal5g5380 986 ProSiteProfiles Leucine-rich repeat profile. 430 451 IPR001611 GO:0005515
Mal5g5380 986 CDD STKc_IRAK 678 969 - -
Mal5g5380 986 PRINTS Leucine-rich repeat signature 383 396 - -
Mal5g5380 986 PRINTS Leucine-rich repeat signature 428 441 - -
Mal5g5380 986 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Mal5g5380 986 SUPERFAMILY L domain-like 42 267 - -
Mal5g5380 986 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 26 970 - -
Mal5g5380 986 SMART LRR_typ_2 429 451 IPR003591 -
Mal5g5380 986 SMART LRR_typ_2 380 403 IPR003591 -
Mal5g5380 986 SMART LRR_typ_2 332 356 IPR003591 -
Mal5g5380 986 SMART LRR_typ_2 103 127 IPR003591 -
Mal5g5380 986 SMART LRR_typ_2 404 428 IPR003591 -
Mal5g5380 986 SMART LRR_typ_2 151 176 IPR003591 -
Mal5g5380 986 SMART LRR_sd22_2 428 449 - -
Mal5g5380 986 SMART LRR_sd22_2 151 184 - -
Mal5g5380 986 SMART LRR_sd22_2 332 358 - -
Mal5g5380 986 SMART LRR_sd22_2 127 148 - -
Mal5g5380 986 SMART LRR_sd22_2 226 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5380 Mal-Chr5 128379484 128382980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5380 36 978 Receptor kinase-like Gene Family AT3G47570 34.399 1.31e-159 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal5g5380 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5380 - - lang:109346572 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5380 5 128379484 128382980 Mal5g5380 5 128379484 128382980 ECH