Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5363 ATGCCTCTCAACTTGCTCCTTCTCCTCTTCTTATTCTTCTCACACCACGCTCTCTCTTCAGCTTCCGAGCCTCGCAACCCCGAAGTTGTGGCGTTGATGGATATAAAGGAAGCTCTAAATGATCCACACAGTGTATTAAGCAACTGGGATGAATTCTCTGTTGACCCATGTAGCTGGGCTATGATCACTTGCTCTTCTGATTCCTTTGTTATTGGACTGGGAGCTCCTAGTCAATCTCTGTCTGGAACATTGTCTTCATCAATTGCAAATTTAACAAATCTTAAACAAGTGTTACTGCAGAATAACAACATCTCAGGCAAAATACCACCGGAACTTGGAAACCTTCCAAAGCTTCAAACTTTAGATCTTTCAAATAACAAATTCTCTGGATTGATTCCACCTTCACTTAGTCAATTGAATAGTCTTCAGTACATGAGGCTGAACAACAATAGCTTGTCTGGACCCTTTCCTGTTTCACTGGCAAATATCACACAGCTTGCTTTCTTGGACCTGTCTTTTAACAATCTCAGCGGACCATTACCCAAGTTTCCAGCTAGGTCATTTAATATTGTGGGGAACCCGTTAGTTTGTGTAAGTAGCTCTATTGAAGGCTGCTCTGGATCAGTGACCCTTATGCCGGTTCCTTTCTCTCAAATATCATCAGAAGGAAAACACAAGTCCAAAAAACTAGCAATTGCTCTTGGAGTCAGCTTTAGTTGTGTTTCTCTCATAGTCCTGTTTTTGGGGCTCTTTTGGTATAGAAAGAAAAGACAGCATGGAGCCATCTTGTATATTGGTGATTTTAAAGAAGAGGCTGTTGTTAGCTTAGGAAATCTCAAACATTTCGGTTTCAGAGAGCTCCAACACGCAACAGATAGTTTCAGCTCAAAGAATATACTCGGTGCTGGAGGTTTTGGCAATGTTTATAGGGGGAAGCTTGGAGATGGAACATTGGTGGCGGTGAAAAGGCTGAAAGATGTTAATGGGAGTGCTGGTGAGTTACAGTTCCAAACAGAGTTGGAGATGATCAGCTTGGCAGTTCACCGCAATTTGCTTCGCTTAATAGGATATTGTGCTACTCCTAATGACAAAATTCTGGTTTACCCTTATATGTCTAATGGCAGTGTGGCCTCCAGGCTTAGAGGAAAACCGGCTCTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCTCGGGGCCTTTTGTATCTTCATGAGCAATGTGATCCAAAGATCATACACAGAGATGTAAAAGCTGCCAATGTGCTTCTGGATGACGATTATGAGGCTATTGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGATCATGCTGATTCCCATGTCACCACTGCTGTACGTGGCACTGTTGGACACATTGCGCCGGAGTACCTCTCCACCGGCCAATCATCTGAGAAAACTGATGTGTTTGGATTTGGCATTCTCTTATTAGAGCTTATAACTGGAATGACAGCCCTTGAGTTTGGGAAAACCTTGAATCAAAAGGGTGCTATGCTGGAGTGGGTTAAGAAAATACAGCAAGAAAAGAAGGTTGAAGTTTTGGTGGACAAAGAACTTGGGAACAACTATGATAGAATAGAGGTTGGGGAAATGCTACAAGTAGCTTTACTTTGCACTCAATATTTGACAGCTCACCGTCCGAAAATGTCCGAAGTGGTCCGGATGCTTGAAGGAGATGGACTTGCTGAGAAGTGGGCATCAACACATAATTATGGAAGTAACTGCTGGAGCCATAGTCACAGCAACACCAGTAGTAGCAATAGCTCATCTCGTCCTACCACTGGCTCAAAACATGATGACAACTTTCATGATCGTTCAAGCATGTTTGGCATGACCATGGATGATGATGATGATCAGTCTTTGGATTCCTATGCTATGGAACTCTCTGGTCCTAGATAA 1920 0.4292 MPLNLLLLLFLFFSHHALSSASEPRNPEVVALMDIKEALNDPHSVLSNWDEFSVDPCSWAMITCSSDSFVIGLGAPSQSLSGTLSSSIANLTNLKQVLLQNNNISGKIPPELGNLPKLQTLDLSNNKFSGLIPPSLSQLNSLQYMRLNNNSLSGPFPVSLANITQLAFLDLSFNNLSGPLPKFPARSFNIVGNPLVCVSSSIEGCSGSVTLMPVPFSQISSEGKHKSKKLAIALGVSFSCVSLIVLFLGLFWYRKKRQHGAILYIGDFKEEAVVSLGNLKHFGFRELQHATDSFSSKNILGAGGFGNVYRGKLGDGTLVAVKRLKDVNGSAGELQFQTELEMISLAVHRNLLRLIGYCATPNDKILVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDDYEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTLNQKGAMLEWVKKIQQEKKVEVLVDKELGNNYDRIEVGEMLQVALLCTQYLTAHRPKMSEVVRMLEGDGLAEKWASTHNYGSNCWSHSHSNTSSSNSSSRPTTGSKHDDNFHDRSSMFGMTMDDDDDQSLDSYAMELSGPR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5363 639 MobiDBLite consensus disorder prediction 603 619 - -
Mal5g5363 639 Gene3D Ribonuclease Inhibitor 25 207 IPR032675 -
Mal5g5363 639 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Mal5g5363 639 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 639 - -
Mal5g5363 639 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 639 - -
Mal5g5363 639 Gene3D Phosphorylase Kinase; domain 1 265 370 - -
Mal5g5363 639 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Mal5g5363 639 Pfam Protein tyrosine and serine/threonine kinase 297 563 IPR001245 GO:0004672|GO:0006468
Mal5g5363 639 MobiDBLite consensus disorder prediction 583 602 - -
Mal5g5363 639 Gene3D Transferase(Phosphotransferase) domain 1 371 581 - -
Mal5g5363 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Mal5g5363 639 PRINTS Leucine-rich repeat signature 118 131 - -
Mal5g5363 639 PRINTS Leucine-rich repeat signature 163 176 - -
Mal5g5363 639 ProSiteProfiles Protein kinase domain profile. 294 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5363 639 MobiDBLite consensus disorder prediction 583 639 - -
Mal5g5363 639 SMART serkin_6 294 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5363 639 SUPERFAMILY Protein kinase-like (PK-like) 276 564 IPR011009 -
Mal5g5363 639 ProSiteProfiles Leucine-rich repeat profile. 117 140 IPR001611 GO:0005515
Mal5g5363 639 SUPERFAMILY L domain-like 26 202 - -
Mal5g5363 639 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5363 Mal-Chr5 128207030 128211279 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5363 7 639 Receptor kinase-like Gene Family AT5G16000 63.963 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mal5g5363 PK_Tyr_Ser-Thr 3.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5363 - - gmx:100797186 1049.65