Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5352 ATGGAGAATTCAGAAAATGTTGATTCATGTGAAGCTCCAAACTCGACCAATTTGTTCAATGTTGAGGAATCCAATGATGTTTCAATGGAAGAGGAAAACACTAGTGAGGGAGAAACTGAAGGTACTTGTCATTCTGAAGCAAATGATAATAATAGTGTAGATGAAGAGAACGAAGACAACGAGAACGGTGGTGTTGGTTGTGATTTTGGTCCAGAAAAAGCAATTGATGGTCCTGATGATATTGCTAAAGCGAACTTTTACCAAGTAAGTCTAGAGGATTTAATGAAGTTTCATTTCCCAGATGTTGGCGTGGCTTTTATGTTTTATAACTGGTATGCAAACACTAAAGGATTTGCTGCTAGGAAAGATAGAGTTGTGAAAAACTTTAGTGGGGAAATAATACAACATGCATTTGTGTGTCACAGAGAAGGACATAGAGTTGAAAAAAGTAAGGGTTTCATTCGAAAACGTAAACCAAAACCAAAGTCTCGTTGTGGTTGTCATGCTAGATGTCAGGTGCATGTTGAAACAAAGTCTGGAAGATGGTACATCAAGTATTTCAATGATGTTCATAACCATTCATTTCTAGACAAGATATTTACCGGTATGCTCCCTGCGCATAGGAAAATGAGTGAATATGACAAATATCAAATGAGCATCATGAGGAACGTCGGTATGAAGACGAAACACATTTATGGTTTGTTTGCTCATCAGACTGGAGGTTATGAGAATGTAGGATTTTCAAGGCGAGACATGTATAATGAGCAGTATAGGCAAAGACGTACCAATTCCTCTGATGCAAAAAGCACGTTGGATTTCTTATCTGAGTTGTCTTCGAAAGATGATATGTTTTTTTGGCAGCATACAGTAGACAAGGATGGTTGTCTGGAACACCTATTTTGGTGTGATGGTGTTGGTAGAAAGGACTGGTCTGTATTTAGTGATGTATTGGCTTTTGACGCAACTTATAAAAAAAATAAATACTTGTGTTCGGTTGTAGTTTTCTCCGGGGTCAATCATCATAACCAGAGTGTTGTCCTTGCTGCTGCTATTGTTGGAAATGAGACAAATTCGACTTATGTATGGTTGTTGCAACAACTACTTGAAGCAATGGGGGGAAAGAGTCCTTTGTCGGTTATTACTGATGGTGATTTGGCTATGCGAAATGCCATAAAAACTGTTTTTCCTAACGCCCATCATCGTTTGTGTGCTTGGCACTTGCTTCGAAATGCCACGTCTAATGTGAAAGATAACCAATTTGTATCAAGGTTTAGACAGTGTATGTTAGGTGATTTTGATGTTGGTGAGTTCAATCGTAGATGGGATAAACTTGTTGCAGATTTTGGACTTGAGGAAAATTTGTGGGTGTTTCATTTGTACCAAAAGCGTGAAATGTGGGCAGCAGCATACATTAGGGGAAAGTTTTTTGCTGGCTTCCGGACAACCTCCCGTTGTGAGGGGCTTCACTCGAAATTCGGTAAGTATGTCAACCTTAGGGATAATTTGTTGGACTTTATGCGTCATTTTTTCCGTTGGCTTAATTACATGAGGTTTAGAGAAGTTGAAGCTGATTTTTTATCATCATTTGGTGAACCTGTTTTGCAATCACAATTGTACTCTCTTGAAAAGTCAGCTTCTAAAATTTACACAAGAGAAATATTAAATCTTCTTGTCCCTGTTTTCAATAGGGCTTGTACTTGTAGGGTGATTGATATAAAACAATGTGGGTCAAAGTTTATTTACACTGTAGTTAGGTACCGTAAGAAAGATGTGGAATGGCATGTGTCGTTTTGTCAATCAAAGCTAGAATTTATGTGTTCGTGTATGAGATTAGAGTCTATTGGAATTCCTTGTGAACACTTGTTTGCAGTTTTTGTATGGTTAGAAATTGTAAATTTGCCCGATTGTATCATTTTGCCAAGATGGACGAATGCTGCCAAAGATTCTATATCTGGTCTTGAGGGAAAAATTGTAAATCCAAGCGATCCAGCCTTAGTCGGTGCTTATTTATGGATTGTTGAATCATGTAAGAGAATGGCTAATGCAGCAGTTAAATGTGGGAAACCTGAATACATAAGGATAACAATGGATATCATATCAAGACACACTATATTTGATGAAGCTTATGTTGAGGGGACTTTGAAAAATCCAAATAGAGCAAGAAGCAAGGGCTGTGGTGGTGCATCCTCGTCACAAAACAAATGTAAAACACCAAGAAAAGTCCAATCGTGTGGAGCATGCGGAAGACCGGGGCATAATCGTAAGTCTTGTTATACTCCAACCGGGCCGAAAAAAGACAATGTTATTTTTGAAGACATGGTTGTAGATGAAGGCTACACTAATATTGAGATGGATGTCTAG 2361 0.3829 MENSENVDSCEAPNSTNLFNVEESNDVSMEEENTSEGETEGTCHSEANDNNSVDEENEDNENGGVGCDFGPEKAIDGPDDIAKANFYQVSLEDLMKFHFPDVGVAFMFYNWYANTKGFAARKDRVVKNFSGEIIQHAFVCHREGHRVEKSKGFIRKRKPKPKSRCGCHARCQVHVETKSGRWYIKYFNDVHNHSFLDKIFTGMLPAHRKMSEYDKYQMSIMRNVGMKTKHIYGLFAHQTGGYENVGFSRRDMYNEQYRQRRTNSSDAKSTLDFLSELSSKDDMFFWQHTVDKDGCLEHLFWCDGVGRKDWSVFSDVLAFDATYKKNKYLCSVVVFSGVNHHNQSVVLAAAIVGNETNSTYVWLLQQLLEAMGGKSPLSVITDGDLAMRNAIKTVFPNAHHRLCAWHLLRNATSNVKDNQFVSRFRQCMLGDFDVGEFNRRWDKLVADFGLEENLWVFHLYQKREMWAAAYIRGKFFAGFRTTSRCEGLHSKFGKYVNLRDNLLDFMRHFFRWLNYMRFREVEADFLSSFGEPVLQSQLYSLEKSASKIYTREILNLLVPVFNRACTCRVIDIKQCGSKFIYTVVRYRKKDVEWHVSFCQSKLEFMCSCMRLESIGIPCEHLFAVFVWLEIVNLPDCIILPRWTNAAKDSISGLEGKIVNPSDPALVGAYLWIVESCKRMANAAVKCGKPEYIRITMDIISRHTIFDEAYVEGTLKNPNRARSKGCGGASSSQNKCKTPRKVQSCGACGRPGHNRKSCYTPTGPKKDNVIFEDMVVDEGYTNIEMDV* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5352 786 MobiDBLite consensus disorder prediction 1 24 - -
Mal5g5352 786 MobiDBLite consensus disorder prediction 1 72 - -
Mal5g5352 786 PANTHER OS02G0262500 PROTEIN 94 650 - -
Mal5g5352 786 Pfam FAR1 DNA-binding domain 108 195 IPR004330 -
Mal5g5352 786 Pfam MULE transposase domain 316 410 IPR018289 -
Mal5g5352 786 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 94 650 IPR031052 GO:0006355
Mal5g5352 786 ProSiteProfiles Zinc finger CCHC-type profile. 744 757 IPR001878 GO:0003676|GO:0008270
Mal5g5352 786 ProSiteProfiles Zinc finger SWIM-type profile. 591 629 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5352 Mal-Chr5 128094346 128096990 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g5352 MULE 2.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5352 - - ahf:112723376 640.188