Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5339 ATGCGAAATTTGAGCTCACTCAAGCAAGAATTCCTAAGGAAATGGATAAAGGGTCTAAGAAAATATAACTCTGAAAAGAAGAACATGAACTTGTTGGAGAGAAAGAAAGCCATAAAGCTCTCTGCAGATTTAGCCATGGCTTCCACGTCTAAAGACAAAACTACCCTTTGGAGAAAAGCCCTTGTTGCAAATACTTCAACAACCATAGTTGAACAAGACATATCAACAACCTCATCATCCTCACATAAGAAGGTAATAATAAGGAAAAACTCGACAAATTCCTCCTATTCTCTTTATAGAAAAAGGATAATTGGAAGGAGAAACATGTTGAGAAGAAATCGTGCAAAGGAAAGAGTGGAAGCAGGTTTTATTGCGACGAGGTTGGTTAAGGAAAGAACAAGAAGGCTCAAGAGTTTGTTACCGGGTGGAAAATTCATGGATAATGCTTGTTTGGTTGATGAAACCCTAGATTATATTGAATCTCTCAAAGCTCAAGTTGAAGTAATGAGATGTCTTGTTACTGCCTCCGAGCTCTTAATTAATCCACCGTAA 552 0.3768 MRNLSSLKQEFLRKWIKGLRKYNSEKKNMNLLERKKAIKLSADLAMASTSKDKTTLWRKALVANTSTTIVEQDISTTSSSSHKKVIIRKNSTNSSYSLYRKRIIGRRNMLRRNRAKERVEAGFIATRLVKERTRRLKSLLPGGKFMDNACLVDETLDYIESLKAQVEVMRCLVTASELLINPP* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5339 183 CDD bHLH_AtIBH1_like 127 173 IPR044549 GO:0006355
Mal5g5339 183 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 175 IPR044660 GO:0006355
Mal5g5339 183 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 175 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5339 1 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 41.989 7.83e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5339 - - ccaj:109811886 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5339 5 127932401 127932952 Mal5g5339 5 127932401 127932952 ECH