Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5315 ATGCAAACTGAGTCAAACGCAACATCGAATCAAGTGATCAAGTTAAGAGTCGGTGTCCCTAAGAAAGGTGGTTTTGCCCAATTTGTGAATGTAGTTTGGGACTCTCATGAAAATAAGTACAATGTCTCTGGATACTGCATGGATGTTTTCAATGCCGTTTTAAACAACTTGACTTTTAAGGTTTCTCTACAAATTGAACCTTATGTTATTAGTAAATCAAAAGATAGTGCTAGAACATACGATTCACTTGTCCAACTGATCCCTGCAAAGTATGATGTTGTGGTGGGCGACATAACAATCGTGGCGAATCGTGCACGATTTGTAGATTTCACATTGCCATATACAGAAATAGGAGTTAGAATGTTAGTTCCAATTATACATGGGAGGCACCACAAATCCATGTGGATTTTTGTTAAACCCTTCAGTTGGGATCTTTGGTTGAGCATAGTCATAATCTCCATGCTTATAGGGTTTGTCATACTCATGATGGAAAGAAAAGTACATACTCTTCCTGATGAGCATTCACCATATCGACAACAGCTCAGCGTAATAATGATCTTATGGTTTCCGATATCACAAACTGTTCTTCCTGAAAGAGACGTGGTTGCTAGGAACTGCTCGAGATTTGTGTTAATGGTTTGGCTTCTATTGGCATTCGTTCTAATGCAAAGTTACACAGCAAATTTGACATCTATATTGACCGTAGATCAAATGCAACCCAATTTTTTAAGCGTGAATGATCTAAGGAAAAGTGGTTATTATGTTGGATATCAAGCTGGTTCTTTTGTTTATGATTTGTTGGTAGAACAATTGAAGTTTGACCGATCCAAGCTGAAGGCATATAGCAACATTTCTAGCTATCACCAAGCTTTAAAGCTTGGAAACCAAGGTGGTGGTGTCATAGCTATATTCGACGAAGTGCCATACCTTAATGCCTACCTTCAAAAATTTGGATCCAATTACATCATAGCTGGTCCCACTTATCCAACTGGTGGATTTGGTTTTGCATTCCCTTACAACTCCAATCTTACTGCTCACTTTTCAAGAGCCATCTTGAATGTGGCTGAAAATTATGATTTAATGGATAAGATTGAGGAAAAATATTTTGGGAAGAGTACTATTGATGGGCTACAAGAGCAATCTACGCAAATGTCTTCATCAGCTTCACCAAGTCTTACCTTTCACAGCTTTGCAGGGTTATTCTTAATCACAGGCATTTCTACCTTATTGGCACTATTTGTCTCTGAAACTCTTATTTGGCAAAAATCAATGTTGATGGTTAAAAAATACAGTCAAAAATACTTGTTACGGTCCCCACCTTCCACAGAAACACGTGTTCATCCCAATGATGTTCATTCAACACAGAGAACTGATCAACCAAGCCATGCTGCATGA 1395 0.3828 MQTESNATSNQVIKLRVGVPKKGGFAQFVNVVWDSHENKYNVSGYCMDVFNAVLNNLTFKVSLQIEPYVISKSKDSARTYDSLVQLIPAKYDVVVGDITIVANRARFVDFTLPYTEIGVRMLVPIIHGRHHKSMWIFVKPFSWDLWLSIVIISMLIGFVILMMERKVHTLPDEHSPYRQQLSVIMILWFPISQTVLPERDVVARNCSRFVLMVWLLLAFVLMQSYTANLTSILTVDQMQPNFLSVNDLRKSGYYVGYQAGSFVYDLLVEQLKFDRSKLKAYSNISSYHQALKLGNQGGGVIAIFDEVPYLNAYLQKFGSNYIIAGPTYPTGGFGFAFPYNSNLTAHFSRAILNVAENYDLMDKIEEKYFGKSTIDGLQEQSTQMSSSASPSLTFHSFAGLFLITGISTLLALFVSETLIWQKSMLMVKKYSQKYLLRSPPSTETRVHPNDVHSTQRTDQPSHAA* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5315 464 SUPERFAMILY Periplasmic binding protein-like II 14 372 - -
Mal5g5315 464 Pfam Ligand-gated ion channel 372 406 IPR001320 GO:0015276|GO:0016020
Mal5g5315 464 Pfam Bacterial extracellular solute-binding proteins, family 3 39 371 IPR001638 -
Mal5g5315 464 MobiDBLite consensus disorder prediction 439 464 - -
Mal5g5315 464 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 4 455 - -
Mal5g5315 464 SMART GluR_14 14 371 IPR001320 GO:0015276|GO:0016020
Mal5g5315 464 CDD GluR_Plant 14 369 - -
Mal5g5315 464 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 4 455 - -
Mal5g5315 464 Gene3D - 133 281 - -
Mal5g5315 464 Gene3D - 8 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5315 Mal-Chr5 127539380 127542441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5315 14 433 Ion Channels AT2G29110 41.648 4.39e-85 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5315 K05387 - gmx:100807817 600.512