Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5314 ATGGGATCCTCCTTGAGTTGTTGTGGCTCAGAGAAAGTCGATGAAGTGCCAACATCATATGGTGTAACTAACAATACGTGGAGAATTTTCACATACAAGGAGTTGCATACAGCTACAAACGGTTTCAGTGATGATTATAAGCTTGGTGAAGGTGGATTTGGGAGTGTCTATTGGGGAAGAACCAGTGATGGTCTCCAGATAGCAGTGAAGAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCTGTAGAAGTTGAAGTACTTGGAAGGGTCAGGCACAAAAATTTATTGGGTCTTAGGGGCTATTGTGTTGGCGATGATCAACGGCTTATTGTCTACGATTACATGCCAAATCTCAGCCTGCTTTCTCATCTCCATGGCCAATATGCTGGTGAAGTGCAACTCAACTGGCAAAGGAGAATGAGCATCGCAATTGGCTCTGCTGAAGGCATTTTGTACTTGCACCATGAGGTCACACCCCACATCATCCACAGGGACATCAAAGCAAGTAATGTTTTACTTGATTCAGATTTTGTGCCTCTAGTTGCTGATTTTGGGTTTGCAAAGCTAATACCAGAAGGAGTAAGCCACATGACAACCCGTGTTAAGGGTACCTTAGGATACTTAGCACCTGAGTATGCTATGTGGGGAAAAGTTTCTGAAAGCTGTGATGTCTATAGTTTTGGAATTCTTCTGTTAGAGCTTGTAACTGGTAGAAAGCCCATAGAAAAGTTACCTGGTGGGCTTAAGAGAACAATAACTGAATGGGCTGAGCCTTTGATAACCAAAGGAAGGTTTAGGGATATGGTTGATCCAAAACTCAGAGGAAACTTTGATGAAAATCAAGTAAAACAAACAGTTAATGTGGCTGCACTTTGTGTGCAAAGTGAACCTGAGAAAAGGCCAAACATGAAGCAAGTTGTTGGTCTTTTGAAAGGACAAGAACCTGATCAAGGGAAAGTGACTAAGATGAGAATAGATAGTATCAAATATAATGAGGAATTATTGGCACTTGATCAACCTAGTGATGATGATTATGATGGAAACAGTAGCTATGGTGTTTTTAGTGCCATTGATGTTCAAAAGATGAATGATCCTTTCAAGCGCGGTGGTGATAACAAGAAAATTGGATATGTAATGTAA 1149 0.4091 MGSSLSCCGSEKVDEVPTSYGVTNNTWRIFTYKELHTATNGFSDDYKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQYAGEVQLNWQRRMSIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFVPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPLITKGRFRDMVDPKLRGNFDENQVKQTVNVAALCVQSEPEKRPNMKQVVGLLKGQEPDQGKVTKMRIDSIKYNEELLALDQPSDDDYDGNSSYGVFSAIDVQKMNDPFKRGGDNKKIGYVM* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5314 382 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Mal5g5314 382 SUPERFAMILY Protein kinase-like (PK-like) 23 313 IPR011009 -
Mal5g5314 382 Gene3D Phosphorylase Kinase; domain 1 14 117 - -
Mal5g5314 382 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5314 382 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 377 - -
Mal5g5314 382 CDD STKc_IRAK 48 315 - -
Mal5g5314 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Mal5g5314 382 Pfam Protein tyrosine and serine/threonine kinase 46 311 IPR001245 GO:0004672|GO:0006468
Mal5g5314 382 ProSiteProfiles Protein kinase domain profile. 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5314 382 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
Mal5g5314 382 PANTHER OS01G0750732 PROTEIN 1 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5314 Mal-Chr5 127436454 127438283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5314 1 364 Trihelix Transcription Factor Family AT1G70460 43.122 4.32e-95 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mal5g5314 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5314 - - gmx:100783365 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5314 5 127436454 127438283 Mal5g5314 5 127436454 127438283 ECH