Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5313 ATGGAACTTCCTTCCTCTTCTAGAATACTAATTGGCCTCTCCTTAGACCTAAATGATAGCAAGGAGCTTCTATCATGGGCAATAAGAGTTCTAGCAAATCCAAATGATACCATTGTTGCTGTGCATGTTCTTGTTGCTGAGAATATGAAGAAACGTGTGTCAGTTAGAAGAAGACAGTCACAACTTAGGCAGGCAAAAGCATATGTTATATCTGTGCTTGGAGAATTCGCACAGACTTGTTGGTCCAAACAGGTTAATCTGGAGGCAAAAGTGGCATTGAGTTCCACAGTAGGTGGTGGTTTAGTGGAGGAAGCCAAGTCAATTTCTGCTGACTTTCTTCTCCTTCGTGGAACAAGAAACAAAACAAATAAAATTGGAACCTCTAAAGGAATTACCAAGTATTGCTTTGAGCATGTGCATGAAGGTTGTACAATGGTCTCAGTTGGAAGGAACACAAAAACAGAACAGAATATCAATTCAAATTCAACAAATTTTCATGAAATGAATGAACATAACAGTTCACCAAGAACAGTACTACTAGATGGACTACTAGAGGGACAATCCAACAGCACAGAAGATGACACATTTAGCACTAGAGCATCAAGCATGACATATACACCTTCATCTGGTCCTAAGATTAAGAGAAAATCAAAGTTAAGAAAATCACAATTCTCATTCAGGTTCATAATATCATTCCTTGGTTCACCATTCAGAATAAAAGGCTTCACCATGTCAAAAATTGAAAAACATCAACCTTTGTTGAAGTGCTTCAGCTATGAAAACATATCAAATGCTACTAATGACTTTCACCAAGATAATATGGTTGGAAGAGGAGGGTACTCAGAAGTATACAAAGGTGATCTTTCTAATGGAGAAACCATTGCTGTGAAGAGGTTAACCAAAGACAACAAAGATCCAAACAAGGAAAAAGAGTTCCTTATGGAGTTGGGTATTATTGGACATGTTTGTCATCCTAATACTGCATCTTTATTGGGCTACTGCATTGAAAATGGACTCTATCTCATTTTCAATTACTCTCAAAATGGAAACTTGTCAACTGCATTGCATGGTTATGCAGGAAATTCACTTGACTGGCCAATAAGATACAAAATAGCTATTGGAGTTGCAAGGGGTCTCCATTATCTTCATAAATGTTGCAAACACAGAATAATTCATCGTGACATTAAAGCCTCCAATGTTCTTCTTGGTCCTGATTATGAACCACAGATTACTGATTTTGGACTTGCAAAGTGGCTTCCTAACAAATGGACTCACCATGCTGTAATCCCAGTGGAGGGAACATTTGGATATTTAGCACCAGAGGTCTTTATGCATGGTATTGTGGATGAGAAAACTGATATTTTTGCATTTGGTGTTCTTCTTCTGGAGATTGTAACTGGAAGAAGACCTGTTGATTCATCAAAGCAAAATATTCTCCTATGGGCAAAGCCTCTGATGGAATCAGGGAATATTGCTGAGCTGGCTGATCCAAGAATGGAAGGTAGATATGATGCAGAGCAACTGTATAGGGTAGTCCTAACAGCTTCATACTGTGTCAGACAAACTGCCCTTTGGCGTCCCGCAATGACCGAGGTGTTAGAGCTGCTAACCAATGGCCAAGACTATGAAGTTGGAAAGAGTTGGAGAATCCCAAAGTTCACTTCTGATGAATTGGATGATTACTCTATGATTTTTGGATATGATGTCCCCTCAGACATATCTCTAGAGGATTATTTGTGA 1740 0.3879 MELPSSSRILIGLSLDLNDSKELLSWAIRVLANPNDTIVAVHVLVAENMKKRVSVRRRQSQLRQAKAYVISVLGEFAQTCWSKQVNLEAKVALSSTVGGGLVEEAKSISADFLLLRGTRNKTNKIGTSKGITKYCFEHVHEGCTMVSVGRNTKTEQNINSNSTNFHEMNEHNSSPRTVLLDGLLEGQSNSTEDDTFSTRASSMTYTPSSGPKIKRKSKLRKSQFSFRFIISFLGSPFRIKGFTMSKIEKHQPLLKCFSYENISNATNDFHQDNMVGRGGYSEVYKGDLSNGETIAVKRLTKDNKDPNKEKEFLMELGIIGHVCHPNTASLLGYCIENGLYLIFNYSQNGNLSTALHGYAGNSLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPEVFMHGIVDEKTDIFAFGVLLLEIVTGRRPVDSSKQNILLWAKPLMESGNIAELADPRMEGRYDAEQLYRVVLTASYCVRQTALWRPAMTEVLELLTNGQDYEVGKSWRIPKFTSDELDDYSMIFGYDVPSDISLEDYL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5313 579 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 115 - -
Mal5g5313 579 PANTHER OS08G0249100 PROTEIN 7 569 - -
Mal5g5313 579 ProSiteProfiles Protein kinase domain profile. 269 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5313 579 Gene3D Phosphorylase Kinase; domain 1 237 345 - -
Mal5g5313 579 PANTHER OS08G0249100 PROTEIN 7 569 - -
Mal5g5313 579 MobiDBLite consensus disorder prediction 187 216 - -
Mal5g5313 579 MobiDBLite consensus disorder prediction 187 211 - -
Mal5g5313 579 SUPERFAMILY Protein kinase-like (PK-like) 246 536 IPR011009 -
Mal5g5313 579 Pfam Protein kinase domain 269 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5313 579 Pfam Universal stress protein family 8 139 IPR006016 -
Mal5g5313 579 SMART serkin_6 269 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5313 579 Gene3D HUPs 4 145 IPR014729 -
Mal5g5313 579 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Mal5g5313 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Mal5g5313 579 CDD USP_Like 8 119 - -
Mal5g5313 579 Gene3D Transferase(Phosphotransferase) domain 1 347 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5313 Mal-Chr5 127420866 127424659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5313 257 575 Trihelix Transcription Factor Family AT1G70460 38.872 3.30e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mal5g5313 Pkinase 8.8e-41 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5313 5 127420866 127424659 Mal5g5313 5 127420866 127424659 ECH