Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5309 ATGGTGTCTCCCAAAAATATAGGAAAGTATAGACTTAGCAGGACCATAGGAGAAGGTACATTCTCTAAGGTTAAGCTTGCTTTCAATAGCAACAATGGTGAGAAGGTAGCAATCAAGGTCATTGACAAACAAATGGTCTTGAAAAACAATCTTAAACATCAGGTACAAAGTGAGATTAGAACAATGAAACTTCTACATCATCCTAATATAGTCAGAATTCATGAGGTTATTGGCACAAAAACAAAAATATACATTGTGATGGAATATGTATCAGGAGGCCAACTCTTGGACAAAATGTCCTATTCCAGCAAGTTGAATGAATGTGAGGCAAGAAAACTATTCCAGCAACTTATTGATGCCGTCGACTACTGCCATAACAAGGGAGTATATCATCGCGATTTAAAGCCAGAAAACTTGCTCCTAGACAGCATGGGAAATCTAAAAGTGTCTGATTTTGGATTAAGTGCATTGAATAAGCCTAATGATGTCCTAAACACAAAGTGTGGATCCCCGTGCTACGTAGCTCCTGAGCTGCTGATGAGCAAAGGGTATGATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATTCTTTTTGAGTTACTGGCTGGTTTTCTACCATTTGATGACCAGAACTTGATGAGTTTATACCATAAGATATGCAGAGCGGAATACGTATGCCCCCCATGGTTTACTCAAAGTCAAAAGAAACTAATTGCGAAAATACTTGAACCGCGTCCTGGAAAGCGGATAACTATTTCGGATATTATTGATGATGAGTGGTTTCAAACAGATTATAAGCCTATTTGCGCGTATGAATTTGATCCGGTCATTAACTTGGATGACGATAGTTGTGCTTTCGATTCAATTGAGGAGAAAGCTACAAAGCCAACGATAACCAAGTCCTCAAGCTTCATTAATGCGTTTCAACTGATAGCCATGTTTCAGGACCTTGATTTATCCACCCTTTTTGAAGAAAAGGATCACACGAAGCAGACAACAAGGTTTGGATCCCAACATACAATCACTGAAACCGTCGAAAAAATAGAAGCTGCTGCCACAGATGTTAGACTGTCAGTAGAGAAAATGAACAACTTAAAGATGAAAATGCACTCGAAGCAGACAATGACAAGGTGTTCTAGATCATACTTTGACATGTCAGCTGAGGTGATAGAAGTTGCTCCGGCTCATTGTGTTATACAAATATCAAAATCTGTTGGAGATCTAAGAATGTACAATGAATTTTGCGAAAGTTTATCAAGTCTGCTGAAAGAAAAATCTAGCATGCCACCACACGGCCAAGATTCTGCGGATCAATGCGACGCTGGCAGCATAGAAAAGCAAGATGCTGATTGTACTGGTTTATGTATTGATCAACAGGTTGTAGATTTAGATCAAGTCTATGTGGTTTTATTTTATTGA 1422 0.3917 MVSPKNIGKYRLSRTIGEGTFSKVKLAFNSNNGEKVAIKVIDKQMVLKNNLKHQVQSEIRTMKLLHHPNIVRIHEVIGTKTKIYIVMEYVSGGQLLDKMSYSSKLNECEARKLFQQLIDAVDYCHNKGVYHRDLKPENLLLDSMGNLKVSDFGLSALNKPNDVLNTKCGSPCYVAPELLMSKGYDGAAADVWSCGVILFELLAGFLPFDDQNLMSLYHKICRAEYVCPPWFTQSQKKLIAKILEPRPGKRITISDIIDDEWFQTDYKPICAYEFDPVINLDDDSCAFDSIEEKATKPTITKSSSFINAFQLIAMFQDLDLSTLFEEKDHTKQTTRFGSQHTITETVEKIEAAATDVRLSVEKMNNLKMKMHSKQTMTRCSRSYFDMSAEVIEVAPAHCVIQISKSVGDLRMYNEFCESLSSLLKEKSSMPPHGQDSADQCDAGSIEKQDADCTGLCIDQQVVDLDQVYVVLFY* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5309 473 PANTHER SERINE/THREONINE KINASE 6 428 - -
Mal5g5309 473 ProSitePatterns Protein kinases ATP-binding region signature. 16 48 IPR017441 GO:0005524
Mal5g5309 473 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5309 473 Gene3D Kinase associated domain 1, KA1 301 426 - -
Mal5g5309 473 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5309 473 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 428 - -
Mal5g5309 473 SUPERFAMILY Protein kinase-like (PK-like) 7 291 IPR011009 -
Mal5g5309 473 CDD CIPK_C 307 424 - -
Mal5g5309 473 Pfam NAF domain 304 362 IPR004041 GO:0007165
Mal5g5309 473 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Mal5g5309 473 Gene3D Transferase(Phosphotransferase) domain 1 90 275 - -
Mal5g5309 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Mal5g5309 473 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Mal5g5309 473 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5309 Mal-Chr5 127354085 127357358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5309 2 419 CBL-interacting serine-threonine protein kinases AT1G01140 47.775 2.67e-144 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mal5g5309 Pkinase 1.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5309 - - mtr:MTR_4g128820 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5309 5 127354085 127357358 Mal5g5309 5 127354085 127357358 ECH