Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5301 ATGTGTAATAAAGGGTTTCAATGTTTAAGCGAGTCTGAGAGTACTATAATTGATCATAGCCATAGACAACAACACTTTATTATGATGGATAGTCCCACAGCCATTAGATCGCCGGCCACCACCGGTTCGGGTTCCGGCTCGAACGAGGATGGCCGGCGTGTTAAATTTTTATGTAGTTTCTTAGGTAGCATAATGCCACGTCCACAAGATGGCAAGTTACGTTATGTTGGTGGTGAGACACGGATTGTGAGTGTTTCTAGGGATATTGGTTTTGAGGAGTTGATGGGGAAAATGAGAGAGTTGTATGATGGTGTGGCTGTGTTGAAGTATCAGCAACCTGATGAAGATCTTGATGCTCTTGTTTCTGTTGTTAATGATGATGATGTGGTTAATATGATGGAAGAGTATGATAAATTGGGGTCTGGAGATGGGTTTACTAGGCTTAGGATTTTCTTGTTTTCGCAATCCGAGCAAGATGGTTCGGCCCATTTTATTGATGGGGATGATCCTGAGAGGAGGTATGTGGATGCATTGAATAGTTTGAATGATGCTTCTGAGTTAAGGAGATTGCAACATATGGAGTTTCCTATGATTGGTGGTGTTGAGGATATTAATGTGGGTGATCAGTTCATTAATCCGATCGGCGTGGAAAATGGGATTCATAGTCAGAGAAGTGGGGAGCTAGCTATGTCACAATACGGTTTGCATCATATGCCTATTCAGCATCAGCAGCATATGGGCCAGAGGTATAATGAAATCGATGCTCCGTGGAATTCTGGTTATTACTCTCCTAGGCATCTTGGTCAGTGTCACCATGACTCTAGATCATCATTGGTTGAGTATCCGTCTTCACCTTCTGGCGCAAGGTACCGTATGCCCTTTCCTGAGATGCCAGATAAGGGAATTGATAGAGTGTCGGATGAGTATTCTCGACATCACGTAAATCACCATCCCATGTATGATAATCAACCGCAGTATCCGGAAAACGTTGTGTGGTTGCCGACTGGACCAGCACATGGTGATAAGTCTGGTTTTCCAGGCAACGTTCTTCATGGTTCTCATGCTCTTGATGGGAATAATATATGTGAACACTGTCACATGGGTTTCCATAGACCTCCACCACATTTGGAGCATCCTAATATGCTTCCACCTGTTGCCATTCCATGTCCAGAATGCCCTTCAAGCAGGGATGCTCTCACAGTGAATGCTGATGCCAAGTTACAGCCTACAATGTATCCTCCCAATGATACTCAGAATCATGAGAGAGGATGTGGTTTGCAGCATCAGAGTTCTGGAAGAGTGAATGATCATTATGTTGGTGATGTTCCTATCATTAATTTCCCTCCTGGACATGGTAGTATGATTGACGGACACGTTCCTCCTTCCAATCATGTTCATCAAAAGGTTGGACCTGAATTGGGGGTTGAACTGTTCACTGACCAAACCATGGCTGCTATACCGCATTTAAAAATTCCTCCTTTGGAAGAATCCAGTGTGCAATACGGAAATGCACCTTCTCCATATGGAGTAGATAATAATTACGCTGTTCCTCGTGGACATGCACCTGGTTATACTCTTTGGAGGAACGGTCCGACTCCAGTTCATATTGGAGCACCACATGAGGCAACTACTCTACCTCAGCCGATTGATGGTGTGATAAATGCTGGAATAATCAGGGGAGAGGGCAGTCCAGGATTTTTCAATAGACCAGATAGTCAAAATCTTTGGGTTGATTCGTCACAGAAGTTTTCAGGTCATGATGGGTCAGCTATCCCAGAATACACTTATGCCAATGCTCCGAAGTTGAATCCAATGGCCATTGGTCAGGAAAATCAACAACCGGTTATTGTAGATGCCATCCATCCTCCACAGGACGCAAATGCCGGTACCTGCTTGAAACCTGTGCAGATGCAAAAATCTTCTTTTAATATGGTTCACAATAACGAGGTTTTAAAAAATGATACTAAAATGACTGAAGCGACGAGTTTGCAATCTATAAGTTTGGTTGGAGAAGGAAAAGAGGCAAAAAATGAGGACAAGGTTGAAAACTCTAATGTGCAAAGTATATCTTCTCTCGAGAAAAATCAAAATGTTGGAAATGTGTCCAACTCTACTGCTTCTACTGTTAAGCATAATAATTCATCTTTGAAACCTGCATCAGCGTGTGGACTTGTTGAGAAACTCGCTGATAAGGACTGTTCTGTTCCTAAAGATTCTCAGCATTTAGTTGATCAGTTCAATATCTTGCCTGAGTTGATTGCTTCTGTTAAAAAGGCTGCGTTGGAATGCCCTGTCGAGGTGAAACCTACAGGCAAAGAGCAAGCCGATTGTCAGATGAACAATTCGAATACCAAAGAAGAAACAGCAAATGAAGTTGAAACAGTGAATGCTCATGGTGATATAGAATTGGACACGGAAAATGAGCATGTAGATACTTCTAAAATCGAGCCTACAAAGGCTGAGGCAGAAGCAATTGCTAGGGGATTGCAGACGATTAGAAATGATGATTTGGAGGAGATCCGTGAGCTAGGTTCTGGAACTTATGGGGCTGTTTATCATGGAAAATGGAAAGGTTCTGATGTCGCCATTAAGAGAATAAAAGCTAGTTGTTTTGCCGGAAGACCATCCGAAAGAGCAAGATTGATTGCAGATTTCTGGAAGGAGGCGTTGATGCTGAGTTCATTACATCATCCGAATGTTGTCTCCTTCTATGGTATTGTCCGTGATGGCCCTGATGGTTCTTTAGCAACAGTGACAGAGTTCATGGTTAATGGATCTTTGAAACAGTTTTTGCATAAGAAGGACAGAACGATAGATCGTCGGAAGAGGCTCATTATAGCCATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAGAACATAGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTTAATATGAGAGATCCGCAACGGCCTGTCTGCAAGATTGGTGATTTGGGTCTATCAAAGGTTAAACAACACACTCTAGTGTCTGGAGGGGTACGCGGAACTTTGCCATGGATGGCTCCCGAACTTCTTAGCGGAAAAACCAATATGGTGTCAGAGAAGATTGATGTTTACTCGTTCGGGATAGTCATGTGGGAATTACTCACAGGTGATGAACCATATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATTGTAAACAACACTTTACGCCCTCAAATCCCGACTTGGTGCGATCCTGAGTGGAAGTCTCTAATGGAAAGTAGTTGGGCTTCTGATCCTGTAGAAAGGCCATCGTTTTCAGAAATTTCCAAGAAGCTGAGGAGTATGGCTGCTTCAGTGAATGTGAAATAG 3333 0.4284 MCNKGFQCLSESESTIIDHSHRQQHFIMMDSPTAIRSPATTGSGSGSNEDGRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVSRDIGFEELMGKMRELYDGVAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSAHFIDGDDPERRYVDALNSLNDASELRRLQHMEFPMIGGVEDINVGDQFINPIGVENGIHSQRSGELAMSQYGLHHMPIQHQQHMGQRYNEIDAPWNSGYYSPRHLGQCHHDSRSSLVEYPSSPSGARYRMPFPEMPDKGIDRVSDEYSRHHVNHHPMYDNQPQYPENVVWLPTGPAHGDKSGFPGNVLHGSHALDGNNICEHCHMGFHRPPPHLEHPNMLPPVAIPCPECPSSRDALTVNADAKLQPTMYPPNDTQNHERGCGLQHQSSGRVNDHYVGDVPIINFPPGHGSMIDGHVPPSNHVHQKVGPELGVELFTDQTMAAIPHLKIPPLEESSVQYGNAPSPYGVDNNYAVPRGHAPGYTLWRNGPTPVHIGAPHEATTLPQPIDGVINAGIIRGEGSPGFFNRPDSQNLWVDSSQKFSGHDGSAIPEYTYANAPKLNPMAIGQENQQPVIVDAIHPPQDANAGTCLKPVQMQKSSFNMVHNNEVLKNDTKMTEATSLQSISLVGEGKEAKNEDKVENSNVQSISSLEKNQNVGNVSNSTASTVKHNNSSLKPASACGLVEKLADKDCSVPKDSQHLVDQFNILPELIASVKKAALECPVEVKPTGKEQADCQMNNSNTKEETANEVETVNAHGDIELDTENEHVDTSKIEPTKAEAEAIARGLQTIRNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKTNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESSWASDPVERPSFSEISKKLRSMAASVNVK* 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5301 1110 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Mal5g5301 1110 ProSiteProfiles Protein kinase domain profile. 837 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5301 1110 Gene3D Transferase(Phosphotransferase) domain 1 924 1109 - -
Mal5g5301 1110 PANTHER - 30 1110 - -
Mal5g5301 1110 SUPERFAMILY Protein kinase-like (PK-like) 829 1098 IPR011009 -
Mal5g5301 1110 CDD STKc_MAP3K-like 843 1100 - -
Mal5g5301 1110 Pfam Protein tyrosine and serine/threonine kinase 838 1100 IPR001245 GO:0004672|GO:0006468
Mal5g5301 1110 SUPERFAMILY CAD & PB1 domains 70 159 - -
Mal5g5301 1110 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 1110 - -
Mal5g5301 1110 PRINTS Tyrosine kinase catalytic domain signature 1071 1093 IPR001245 GO:0004672|GO:0006468
Mal5g5301 1110 PRINTS Tyrosine kinase catalytic domain signature 1027 1049 IPR001245 GO:0004672|GO:0006468
Mal5g5301 1110 PRINTS Tyrosine kinase catalytic domain signature 919 932 IPR001245 GO:0004672|GO:0006468
Mal5g5301 1110 PRINTS Tyrosine kinase catalytic domain signature 956 974 IPR001245 GO:0004672|GO:0006468
Mal5g5301 1110 ProSitePatterns Protein kinases ATP-binding region signature. 843 864 IPR017441 GO:0005524
Mal5g5301 1110 Gene3D Phosphorylase Kinase; domain 1 822 923 - -
Mal5g5301 1110 Pfam PB1 domain 69 154 IPR000270 GO:0005515
Mal5g5301 1110 Gene3D - 72 156 - -
Mal5g5301 1110 CDD PB1_UP2 57 153 - -
Mal5g5301 1110 SMART serkin_6 837 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g5301 1110 SMART PB1_new 68 153 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5301 Mal-Chr5 127279773 127284304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5301 48 1110 MAP Kinase Kinase Kinase AT5G57610 52.878 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mal5g5301 PK_Tyr_Ser-Thr 4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5301 - - gmx:100779077 1662.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5301 5 127279773 127284304 Mal5g5301 5 127279773 127284304 ECH