Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5281 ATGAAAGAATATTGGACTTCATTTGCATCAATTCTTGGTGTATTTGCATTCTTCCAATCAATCCTCCAAACAGTTTTCCCACCAGAACTCCGTTTCGCATCCGCTAAACTTTTCAACAAACTCTTCAACTGTTTCTCATCTTACTGTTACTTCGAAATAACGGAAATCGACGGCGTTAACACCAACGAACTCTACAACGCGGTTCAGCTTTACCTAAGCTCCTCCGTTTCCATCACCGGTAACCGTTTAAGCCTAACACGCGCCGTTAACTCAAGCGCCTTCACCTTCAACCTCGCAAACAATGACAGCATCGTCGATACATTTAACGGCGTTAACGTTGTTTGGGAACACGTTGTCACACAGAGAAACTCTCAAACATTTTCATGGCGTCCATTACCAGATGAAAAACGTGGTTTCACTCTTCGTATCAAGAAAAAAGATAAACACTTGTTGTTAAATTCTTATTTGGATTACATTATGGAAAAAGCGAGTGATATACGAAGAAAAAATCAGGATCGTTTATTGTACACAAATTCAAGAGGTGGGTCGTTGGATTCAAGGGGTCATCCATGGGAATCTGTGCCGTTTAAGCATCCAAGTACTTTTGATACATTGGCTATGGATCCTGAAAAGAAGAAAGAGATTATGGAAGATTTGCAAGATTTTGCAAATGGGCAAGGTTTTTATCATAAAACTGGTAGGGCTTGGAAAAGAGGGTATCTTCTTTATGGTCCTCCAGGAACTGGAAAATCTAGCATGATTGCTGCTATGGCTAATTTTCTTGGTTATGATATTTATGATTTGGAGTTAACTGAAGTTCATAGTAATTCTGAACTTAGAAAGCTTCTTATGAAAACAAGTTCTAAGTCTATTATTGTTATTGAGGATATTGATTGTTCTATTAACCTCTCTAATAGAAAAAACAACCAAAAAAATGGTGTTGGTGTTGGTTCTGTTTCTTCTAGGAGTTTCTATGAAAATGGTGTTGGTGAAATGAGAGGTGGTGTTGGTGGTGAAGAGAATGGGAATTCAATAACGCTTTCTGGGTTGTTGAATTTTACTGATGGGTTATGGTCTTGTTGTGGGAGTGAGAAGATTTTTGTGTTTACTACGAATCACATTGAGAAGCTTGATCCTGCTTTGTTGAGGAGTGGGAGAATGGATATGCATATTTTCATGAGTTATTGTTCGATACAAGCTTTGAAGATATTGTTGAAGAATTATTTGGGGTGTGAAGAGGGTGTTGATTTGGATGACTCTGTTTTGAAGGAATTGGAAGAGGTTGTTGAAATGGCGAGGATGACACCAGCTGATATAAGTGAGGTTTTGATCAAGAATAGAAGGAAGAAGGAGAAAGCTGTGGATGAGTTGTTGGAGATTTTGAAGGTGAGAGCAGAGAGGAATGCAAAAAATAGTGGTGTTGTGAGGAGGGAAAATAATGGGGTTGGAGATGAAGATGATGTTGAAGAGGAAGAACAAGAAAAAAGGGCTCTTGATAGTGATAGTCCTAAACTAGAATCTGAGATTGAAGATGATTGCAAGGAAGGATCAGAGGAAGAAGAGAAAATCAAGTGA 1575 0.3854 MKEYWTSFASILGVFAFFQSILQTVFPPELRFASAKLFNKLFNCFSSYCYFEITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRAVNSSAFTFNLANNDSIVDTFNGVNVVWEHVVTQRNSQTFSWRPLPDEKRGFTLRIKKKDKHLLLNSYLDYIMEKASDIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPEKKKEIMEDLQDFANGQGFYHKTGRAWKRGYLLYGPPGTGKSSMIAAMANFLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIVIEDIDCSINLSNRKNNQKNGVGVGSVSSRSFYENGVGEMRGGVGGEENGNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSIQALKILLKNYLGCEEGVDLDDSVLKELEEVVEMARMTPADISEVLIKNRRKKEKAVDELLEILKVRAERNAKNSGVVRRENNGVGDEDDVEEEEQEKRALDSDSPKLESEIEDDCKEGSEEEEKIK* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5281 524 PANTHER BCS1 AAA-TYPE ATPASE 2 516 - -
Mal5g5281 524 SMART AAA_5 236 397 IPR003593 -
Mal5g5281 524 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Mal5g5281 524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 450 IPR027417 -
Mal5g5281 524 Pfam ATPase family associated with various cellular activities (AAA) 241 309 IPR003959 GO:0005524|GO:0016887
Mal5g5281 524 Coils Coil 488 508 - -
Mal5g5281 524 MobiDBLite consensus disorder prediction 495 524 - -
Mal5g5281 524 CDD AAA 237 298 - -
Mal5g5281 524 PANTHER BNAC03G12930D PROTEIN 2 516 - -
Mal5g5281 524 MobiDBLite consensus disorder prediction 472 524 - -
Mal5g5281 524 Gene3D - 192 395 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5281 Mal-Chr5 126964879 126966453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5281 210 435 Calmodulin-binding Proteins AT3G56690 25.969 2.71e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5281 5 126964879 126966453 Mal5g5281 5 126964879 126966453 ECH