Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g5266 ATGAATGCGAGCCAGTTCGACGGTAACGCTGCCTTCGCCGGCGGCGGATTCATGCCTTCTGAGACCACTCAGGGCGGTGAATCCTCTTTCACTCCCTCCAAGAATCGTGAAAGTCAGACGTTGCTTCCTCTGACGATCAAGCAGATCAAGGATGCTGTTCAATCAAGTGATGATAGAACCAATCTGACTATCGACGGTGTTGATGTTAACACCATTACTCTTGTGGGTAGGGTTTGCAACAAAGCTGGACAAATTACTGATGTTAAATTTGTACTCGATGATGGTACCGGAACGATTGAGTGCACTAAATGGCTTCATGATCCTGCCGATTCAATTGCAGTGGATGGTATCTTGAATGGAATGTATGTGCGGCTATATGGACAGTTGAAAGGTTTTCAGGGTAAAAAAACCTTAAATGTTTTCTCTTTCAGGCCCGTTACTGACTTCAATGAGATTGCCCACCATTTCATTGATTGCATTTATGTTCATCTATATAATTCGAGGTTACGGCATACCCAGACTAGCGTCCCCAATCAGCAACATGTTCCCAATTCCACACAAATCACTCCCACCAAAGGTTTTCAAGCTCAAGCCATTCCAGCAAATCAACTCTCTGGTCAGCATAATAATCGTCAGAAGAGTGTTGAAGAATTGGTGTTAGAGTTTTTGGTTGTTCCCACAAACAGGGATATTGAGGAGGGAATCCATTGTGATTCTATTGCAGAGCATCTTGGAGTTCCTTTAGATAAAGTCATGCTGGCTATTAATAATCTTGGTCAAGAAGGTCTCGTTTATGAATGTTTACCGAAGCACTTTAAGTCATGTGTCAACGGTTGA 837 0.4313 MNASQFDGNAAFAGGGFMPSETTQGGESSFTPSKNRESQTLLPLTIKQIKDAVQSSDDRTNLTIDGVDVNTITLVGRVCNKAGQITDVKFVLDDGTGTIECTKWLHDPADSIAVDGILNGMYVRLYGQLKGFQGKKTLNVFSFRPVTDFNEIAHHFIDCIYVHLYNSRLRHTQTSVPNQQHVPNSTQITPTKGFQAQAIPANQLSGQHNNRQKSVEELVLEFLVVPTNRDIEEGIHCDSIAEHLGVPLDKVMLAINNLGQEGLVYECLPKHFKSCVNG* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g5266 278 CDD RPA2_DBD_D 71 164 - -
Mal5g5266 278 Gene3D - 33 168 IPR012340 -
Mal5g5266 278 Gene3D - 192 276 IPR036388 -
Mal5g5266 278 PANTHER REPLICATION PROTEIN A-RELATED 6 278 IPR040260 -
Mal5g5266 278 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A-LIKE 6 278 - -
Mal5g5266 278 MobiDBLite consensus disorder prediction 21 37 - -
Mal5g5266 278 SUPERFAMILY Nucleic acid-binding proteins 41 167 IPR012340 -
Mal5g5266 278 Pfam OB-fold nucleic acid binding domain 73 144 IPR004365 GO:0003676
Mal5g5266 278 PIRSF RPA32 2 276 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal5g5266 278 Pfam Replication protein A C terminal 163 266 IPR014892 -
Mal5g5266 278 MobiDBLite consensus disorder prediction 12 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g5266 Mal-Chr5 126744338 126747584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g5266 1 226 Core DNA Replication Machinery Family AT3G02920 48.035 6.72e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g5266 K10739 - gmx:100782819 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5266 5 126744338 126747584 Mal5g5266 5 126744338 126747584 ECH